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Table 1 The candidate SARS-CoV-2 epitopes for the Egyptian most frequent alleles of MHC class I molecules

From: Immunoinformatics approach of epitope prediction for SARS-CoV-2

Serial in Supplementary Table 1 Position HLA haplotype Epitope sequence 4PRP 5YXN Antigenicity response Score Protein HLA crystal structure
12 214 HLA-B*35:01, HLA-A*02:01 RDLPQGFSA − 255.9 − 185.69 0.8947 0.286485 Spike 4PRP, 5YXN
28 269 HLA-B*35:01, HLA-A*02:01 YLQPRTFLL − 236.05 − 224.82 0.4532 0.972695 Spike 4PRP, 5YXN
25 691 HLA-A*02:01 SIIAYTMSL − 230.22 − 220.73 0.5234 0.575949 Spike 5YXN
7 2209 HLA-A*02:01 FCLEASFNY − 314.45 − 191.75 1.5042 0.411451 ORF1ab 5YXN
79 103 HLA-B*35:01, HLA-A*02:01 TLGVLVPHV − 295.42 − 211.69 0.5583 0.713924 ORF1ab 4PRP, 5YXN
241 3050 HLA-B*35:01 GEYSHVVAF − 293.81 − 213.74 0.6428 0.523635 ORF1ab 4PRP
14 487 HLA-B*35:01 NCYFPLQSY − 225 − 183.06 0.8743 0.558006 Spike 4PRP