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Table 8 Peptides showing interaction to HLA-DRB0101, NETMHCII PAN 4.0 server results, and VaxiJen score

From: Codon usage studies and epitope-based peptide vaccine prediction against Tropheryma whipplei

Pos Peptide ID Score Rank VaxiJen score Inference
39 NRRFIVLTGNREFTA WP_042506957.1 0.958934 0.16 −0.4516 Nonantigenic
316 KPSYLSALSAHLNDK WP_042506954.1 0.978324 0.06 0.7208 Antigenic
384 LQKYLNLNSLPVRIE WP_042506954.1 0.968518 0.11 1.1646 Antigenic
580 IEDISALPGFGVKTA WP_042506954.1 0.960251 0.15 0.7039 Antigenic
227 RDKIQAAQTVLSRSA WP_042506954.1 0.805061 0.85 0.1459 Antigenic
77 EFSRFLVSSGVQVRF WP_042506082.1 0.651559 1.60 0.4449 Antigenic
235 KTPLISAIGHEADRP WP_042506175.1 0.966542 0.12 −0.0952 Nonantigenic
231 DDFWAALRAYSGRSR WP_042506056.1 0.960550 0.15 0.2368 Antigenic
24 FKSFNYNVAIGVRQP WP_011096407.1 0.916978 0.35 0.7126 Antigenic
3 PARFFFVSPLSCVKP WP_206536426.1 0.691033 1.40 0.6685 Antigenic