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Table 2 Tropheryma whipplei RefSeq codon table contains 88597 CDSs (28006357 codons)

From: Codon usage studies and epitope-based peptide vaccine prediction against Tropheryma whipplei

Codon Usage frequency No. of codons Codon Usage frequency No. of codons Codon Usage frequency No. of codons Codon Usage frequency No. of codons
TTT 30.88 (864933) TCT 19.41 (543618) TAT 16.82 (470999) TGT 7.23 (202580)
TTC 11.07 (309980) TCC 9.94 (278337) TAC 10.24 (286912) TGC 6.09 (170524)
TTA 10.79 (302319) TCA 15.06 (421837) TAA 1.00 (27960) TGA 1.11 (31013)
TTG 18.49 (517778) TCG 10.24 (286768) TAG 1.14 (31981) TGG 10.09 (282675)
CTT 32.53 (910922) CCT 9.92 (277793) CAT 12.79 (358300) CGT 11.66 (326630)
CTC 13.10 (366773) CCC 9.27 (259711) CAC 7.92 (221772) CGC 11.85 (331835)
CTA 10.11 (283081) CCA 13.02 (364568) CAA 12.40 (347268) CGA 6.07 (169892)
CTG 18.23 (510468) CCG 12.02 (336672) CAG 17.96 (503036) CGG 6.98 (195455)
ATT 31.40 (879451) ACT 12.53 (350913) AAT 23.82 (667060) AGT 13.41 (375656)
ATC 13.10 (366940) ACC 13.40 (375396) AAC 11.87 (332502) AGC 10.61 (297274)
ATA 23.41 (655721) ACA 17.74 (496749) AAA 26.46 (741084) AGA 13.59 (380649)
ATG 18.25 (511118) ACG 8.30 (232504) AAG 21.39 (598923) AGG 13.55 (379598)
GTT 37.06 (1037894) GCT 21.35 (597805) GAT 37.03 (1037065) GGT 24.77 (693723)
GTC 12.15 (340402) GCC 19.26 (539448) GAC 16.30 (456523) GGC 18.74 (524935)
GTA 14.34 (401675) GCA 26.13 (731733) GAA 25.97 (727374) GGA 14.66 (410657)
GTG 16.39 (459063) GCG 16.86 (472115) GAG 25.54 (715420) GGG 15.16 (424597)