Table 6 West Java originated HLA-DRB1 binding sites of highly antigenic peptides
Peptides | Positions | HLA-2 binding alleles | VaxiJen scores |
|---|---|---|---|
GLRRRPTIGPRKR | 503–515 | HLA-DRB1*04:02 | 2.0738 |
AGLRRRPTIGPRKR | 502–515 | HLA-DRB1*04:02 | 2.0411 |
LRRRPTIGPRKRP | 504–516 | HLA-DRB1*04:02 | 1.9788 |
VQAGLRRRPTIGPRKR | 500–515 | HLA-DRB1*04:02 | 1.8995 |
GLRRRPTIGPRKRP | 503–516 | HLA-DRB1*04:02 | 1.8611 |
AGLRRRPTIGPRKRP | 502–516 | HLA-DRB1*04:02 | 1.8494 |
VQAGLRRRPTIGPR | 500–513 | HLA-DRB1*04:02 | 1.8122 |
QAGLRRRPTIGPRKR | 501–515 | HLA-DRB1*04:02 | 1.8078 |
LRRRPTIGPRKRPA | 504–517 | HLA-DRB1*04:02 | 1.7785 |
AGLRRRPTIGPRK | 502–514 | HLA-DRB1*04:02 | 1.7631 |
AGLRRRPTIGPRKRPA | 502–517 | HLA-DRB1*04:02 | 1.6938 |
QAGLRRRPTIGPR | 501–513 | HLA-DRB1*04:02 | 1.6929 |
GLRRRPTIGPRKRPA | 503–517 | HLA-DRB1*04:02 | 1.6909 |
LRRRPTIGPRKRPAA | 504–518 | HLA-DRB1*04:02 | 1.6606 |
VQAGLRRRPTIGPRK | 500–514 | HLA-DRB1*04:02 | 1.6539 |
QAGLRRRPTIGPRKRP | 501–516 | HLA-DRB1*04:02 | 1.6522 |
GLRRRPTIGPRKRPAA | 503–518 | HLA-DRB1*04:02 | 1.5902 |
VQAGLRRRPTIGP | 500–512 | HLA-DRB1*04:02 | 1.5776 |
LVQAGLRRRPTIGPR | 499–513 | HLA-DRB1*04:02 | 1.5675 |
QAGLRRRPTIGPRK | 501–514 | HLA-DRB1*04:02 | 1.5305 |
LRRRPTIGPRKRPAAS | 504–519 | HLA-DRB1*04:02 | 1.5179 |
FLVQAGLRRRPTIGPR | 498–513 | HLA-DRB1*04:02 | 1.4645 |
LVQAGLRRRPTIGPRK | 499–514 | HLA-DRB1*04:02 | 1.441 |
LVQAGLRRRPTIGP | 499–512 | HLA-DRB1*04:02 | 1.3345 |
FLVQAGLRRRPTIGP | 498–512 | HLA-DRB1*04:02 | 1.244 |