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Table 2 The best primer base sequence of the SARS CoV 2 consensus sequence

From: Reverse transcription loop-mediated isothermal amplification (RT-LAMP) primer design based on Indonesia SARS-CoV-2 RNA sequence

Primer

Sequence 5′–3′

T1_6-F3

GCTTGTGAAATTGTCGGTGGA

T1_6-B3

AGTAGGCCAGTTTCTTCTCTG

T1_6-F2

CTGTGCAAAGGAAATTAAGGAGAG

T1_6-F1c

AGAGTCAGCACACAAAGCCAAAAA

T1_6-B2

ACACACTTTCTGTACAATCCCT

T1_6-B1c

TGGTGGAGCTAAACTTAAAGCCTTG

T1_6-LB

GTGAAACATTTGTCACGCACTCAA

T1_9-F3

CACTGAGACTCATTGATGCTATG

T1_9-B3

CCAACCGTCTCTAAGAAACTCT

T1_9-F2

GTTCACATCTGATTTGGCTACT

T1_9-F1c

GAAGTCAACTGAACAACACCACCT

T1_9-B2

CCTTCCTTAAACTTCTCTTCAAGC

T1_9-B1c

GTGGCTAACTAACATCTTTGGCACT

T1_9-LB

TGAAAAACTCAAACCCGTCCTTG

T4_7-F3

CCTGTTGCTATTCATGCAGATCA

T4_7-B3

CACCAAGTGACATAGTGTAGGC

T4_7-F2

TGGCGTGTTTATTCTACAGGTTC

T4_7-F1c

TGAGTTGTTGACATGTTCAGCCCC

T4_7-B2

TGGATTGACTAGCTACACTACGT

T4_7-B1c

CCATTGGTGCAGGTATATGCGCTAG

T4_7-LB

TCAGACTCAGACTAATTCTCTCGG

T4_52-F3

GTCAGAGTGTGTACTTGGACAAT

T4_52-B3

GTTACAAACCAGTGTGTGCCA

T4_52-F2

GTTGATTTTTGTGGAAAGGGCTATC

T4_52-F1c

AGAAGACTACACCATGAGGTGCTGA

T4_52-B2

TGAAACAAAGACACCTTCACGA

T4_52-B1c

GAACTTCACAACTGCTCCTGCCAT