Fig. 6
GBDP phylogeny based on genome data and TYGS result for PHA-producing bacterial isolate data set. Tree inferred with Fast ME 2.1.6.1 [37] from GBDP distances calculated from genome sequences of Bacillus sp. BNPI-92 and other closely related Bacillus strains. The branch lengths are scaled in terms of GBDP distance formula d5. The numbers above branches are GBDP pseudo-bootstrap support values > 60% from 100 replications, with average branch support of 99.9%. The tree was rooted at the midpoint [38]. A labeled and colored box are annotated by affiliation and corresponding to (1) isDDH species clusters, (2) isDDH sub-species clusters, (3) percent GC (34.8–35.3%), (4) delta statistics (0.1–0.2), (5) genome size (4,614,627–6,234,842 bp), (6) protein count (5255–6243), and (7) user strain (query sequence)