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Table 4 The properties and description of molecular docking results of the nine BanLecs with WT-RBD, which show the lowest energy score, binding affinity, and interaction interface

From: A computational simulation appraisal of banana lectin as a potential anti-SARS-CoV-2 candidate by targeting the receptor-binding domain

No.

Gene name

Criteria

Model

ClusPro lowest energy

(LE)

Prodigy 𝚫G (kJ/mol)

Interaction interface (all residues)

Interaction interface (with key aa residues in RBD)

Salt bridges

H- bonds

Non-bonded

Salt bridges

H- bonds

Non-bonded

1.

Ma09_t10410.1

Best LE

Model 03

−1401.1

−16.1

3

27

260

-

-

-

  

Best 𝚫G

Model 26

−1081.8

−17.4

1

26

297

-

4

1

2.

Ma09_t10460.1

Best LE

Model 03

−1401.1

−16.1

3

27

260

-

-

-

  

Best 𝚫G

Model 26

−1081.8

−17.4

1

26

297

-

1

1

3.

Ma09_t10470.1

Best LE

Model 01

−1428.4

−16.0

1

29

253

-

-

14

  

Best 𝚫G

Model 21

−1162.9

−16.3

1

26

260

-

-

-

4.

Ma09_t10450.1

Best LE

Model 05

−1272.0

−17.4

1

27

274

-

-

13

  

Best 𝚫G

Model 05

−1272.0

−17.4

1

27

274

-

-

13

5.

Ma09_t10350.1

Best LE

Model 01

−1482.8

−14.3

3

18

224

-

-

-

  

Best 𝚫G

Model 27

−1241.6

−18.7

3

22

244

-

-

-

6.

Mba09_g09930.1

Best LE

Model 02

−1441.3

−10.3

3

23

181

-

-

3

  

Best 𝚫G

Model 21

−1137.4

−17.4

1

36

289

-

-

-

7.

Mba09_g09920.1

Best LE

Model 01

−1358.5

−11.7

2

22

204

-

-

3

  

Best 𝚫G

Model 08

−1170.2

−18.3

4

27

322

-

-

-

8.

Mba09_g09880.1

Best LE

Model 03

−1296.0

−13.2

2

24

241

-

-

8

  

Best 𝚫G

Model 21

−1050.3

−16.2

2

23

273

-

-

-

9.

Mba09_g09870.1

Best LE

Model 03

−1400.1

−16.0

-

31

245

-

1

14

  

Best 𝚫G

Model 00

−1115.6

−17.1

2

16

515

-

-

-