Table 5 List of primers used for SCoT analysis
Sl. no | Primer | Primer sequence (5′–3′) | Number of bands amplified | Approximate band length |
|---|---|---|---|---|
1 | SCoT 1 | CAACAATGGCTACCACCA | 3 | 1000–2500 |
2 | SCoT 2 | CAACAATGGCTACCACCC | 3 | 600–2000 |
3 | SCoT 4 | CAACAATGGCTACCACCT | 3 | 250–1500 |
4 | SCoT 6 | CAACAATGGCTACCACGC | 3 | 600–1000 |
5 | SCoT 7 | CAACAATGGCTACCACGG | 2 | 1200–2000 |
6 | SCoT 8 | CAACAATGGCTACCACGT | 2 | 500–1500 |
7 | SCoT 9 | CAACAATGGCTACCAGCA | 8 | 750–3000 |
8 | SCoT 10 | CAACAATGGCTACCAGCC | 2 | 1400–2500 |
9 | SCoT 11 | AAGCAATGGCTACCACCA | 2 | 750–3000 |
10 | SCoT 12 | ACGACATGGCGACCAACG | 4 | 1000–2500 |
11 | SCoT 13 | ACGACATGGCGACCATCG | 1 | 1000 |
12 | SCoT 14 | ACGACATGGCGACCACGC | 4 | 500–2000 |
13 | SCoT 15 | ACGACATGGCGACCGCGA | 6 | 250–2500 |
14 | SCoT 16 | ACCATGGCTACCACCGAC | 7 | 500–2500 |