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Table 6 Selected enriched GO-BPs and KEGG pathways from the enrichment analysis for sub-module (2)

From: Protein-protein interaction (PPI) network analysis reveals important hub proteins and sub-network modules for root development in rice (Oryza sativa)

Term Identifier

Term name

Proteins

P-value

GO:0009734

Auxin-activated signaling pathway

Osj_28507, Os11t0515500-01, Osj_019622, Osj_14626, PIN1, PIN2, PIN3A, IAA13, IAA30, IAA14, ARF12, ARF19, ARF25

1.914000E-19

GO:0009926

Auxin polar transport

Osj_28507, Os08t0564300-04, PIN3A, PIN1, PIN2

3.187130E-07

GO:0006355

Regulation of transcription, DNA templated

IAA14, ARF12, Osj_019622, LAX, ARF19, IAA13, HOX10, ARF25, IAA30, HOX9

0.00001

GO:0016567

Protein ubiquitination

Os11t0515500-01, EL5.1, Osj_14626, EL5.2

0.0002

GO:000958

Positive gravitropism

Os08t0423600-00, PIN2

0.0111

osa04075 (KEGG pathway)

Plant hormone signal transduction

IAA13, IAA14, IAA30

0.0194

GO:0006730

One-carbon metabolic process

Os08t0424100-00, Os08t0423600-00

0.0373

GO:0048364

Root development

EL5.1, EL5.2

0.0713