Genetic diversity and relationship among Indonesian local sheep breeds on Java Island based on mitochondrial cytochrome b gene sequences

Journal of Genetic Engineering and Biotechnology

Table 3 Nucleotide diversity in Indonesian local sheep breeds based on mtDNA Cyt b gene sequences

Breed	n	I	V	S	P	SC	Pi	K
Priangan	6	1137	3	0	3	0.9974	0.00158	1.80000
Garut	6	1136	4	2	2	0.9965	0.00158	1.80000
Batur	7	1136	4	2	2	0.9965	0.00142	1.61905
Wonosobo	5	1140	0	0	0	1.0000	0.00000	0.00000
JTT	7	1138	2	0	2	0.9983	0.00100	1.14286
JFT	5	1140	0	0	0	1.0000	0.00000	0.00000
Sapudi	5	1140	0	0	0	1.0000	0.00000	0.00000
Overall	41	1134	6	1	5	0.9947	0.00119	1.35610

n number of samples, I number of monomorphic sites (invariable sites), V number of polymorphism sites (variable sites), S number of segregation sites (singleton sites), P parsimony-informative sites, Indel insertion-deletion, SC sequence conservation, Pi nucleotide diversity, K average number of pairwise differences