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Table 2 Prediction of mutations’ deleterious effects

From: An in silico analysis of rpoB mutations to affect Chlamydia trachomatis sensitivity to rifamycin

SNP

PredictSNP

MAPP

PhD-SNP

PolyPhen-1

PolyPhen-2

SIFT

SNAP

nsSNP-Analyzer

PANTHER

V136F

D

D

D

D

D

D

D

D

D

Q458K

D

D

D

D

D

D

D

D

-

V466A

D

D

D

N

N

D

D

D

N

A467T

D

D

D

D

D

D

D

D

N

H471N

D

N

D

N

D

D

D

N

N

H471Y

D

D

D

D

D

D

D

D

D

H471L

D

D

D

D

D

D

D

D

D

I517M

D

D

D

D

D

D

D

D

D

  1. N refers to the neutral/stable effect of variant, while D refers to its deleterious/nonstable effect