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Journal of Genetic Engineering and Biotechnology

Table 1 Characterization of StU-box genes in potato

From: Genome-wide identification of StU-box gene family and assessment of their expression in developmental stages of Solanum tuberosum

Name genes

Classes

Groups

Number of amino acids

MW (kDa)

pI

Location

StU-box 1

Class I

U-box

1107

123,908.47

6.19

Nucleus

StU-box 2

Class I

U-box

415

45,438.52

6.21

Nucleus

StU-box 3

Class I

U-box

421

47,625.46

8.58

Nucleus

StU-box 4

Class I

U-box

451

50,425.96

8.79

Nucleus

StU-box 5

Class II

U-box and ARM

993

110,626.91

5.53

Cytoplasm, Nucleus

StU-box 6

Class I

U-box

411

45,845.54

8.43

Cell membrane, Nucleus

StU-box 7

Class I

U-box

454

51,351.98

8.30

Nucleus

StU-box 8

Class I

U-box

392

43,658.85

8.89

Nucleus

StU-box 9

Class I

U-box

406

45,325.95

8.92

Nucleus

StU-box 10

Class I

U-box

410

45,770.37

8.53

Nucleus

StU-box 11

Class I

U-box

406

45,383.30

9.00

Nucleus

StU-box 12

Class I

U-box

418

47,340.67

8.59

Nucleus

StU-box 13

Class I

U-box

407

45,417.16

8.92

Nucleus

StU-box 14

Class I

U-box

407

45,879.18

8.25

Nucleus

StU-box 15

Class II

U-box and ARM

892

100,112.52

5.79

Nucleus

StU-box 16

Class I

U-box

736

81,487.49

6.51

Nucleus

StU-box 17

Class IV

U-box and Ufd2p

1040

117,961.67

5.33

Nucleus

StU-box 18

Class II

U-box and ARM

486

53,465.24

6.85

Nucleus

StU-box 19

Class I

U-box

234

26,559.35

5.90

Cytoplasm

StU-box 20

Class I

U-box

1008

113,927.23

6.54

Nucleus

StU-box 21

Class I

U-box

735

81,319.01

6.19

Nucleus

StU-box 22

Class I

U-box

1007

112,311.90

5.38

Cytoplasm

StU-box 23

Class I

U-box

682

76,344.41

8.05

Nucleus

StU-box 24

Class I

U-box

123

13,781.97

6.58

Cell membrane, Nucleus

StU-box 25

Class II

U-box and ARM

535

58,830.95

8.63

Nucleus

StU-box 26

Class III

U-box and kinase

809

90,711.44

6.21

Nucleus

StU-box 27

Class IV

U-box and usp and kinase

787

88,990.19

5.78

Nucleus

StU-box 28

Class II

U-box and ARM

611

68,632.65

6.23

Nucleus

StU-box 29

Class I

U-box

647

69,896.18

8.44

Nucleus

StU-box 30

Class I

U-box

411

46,061.25

5.55

Nucleus

StU-box 31

Class I

U-box

443

49,617.63

6.06

Nucleus

StU-box 32

Class III

U-box and kinase

1484

166,346.74

5.75

Nucleus

StU-box 33

class I

U-box

418

46,061.50

8.80

Nucleus

StU-box 34

Class I

U-box

813

89,574.11

5.46

Nucleus

StU-box 35

Class I

U-box

442

50,230.38

9.18

Nucleus

StU-box 36

Class I

U-box

449

48,963.46

7.05

Cytoplasm, Nucleus

StU-box 37

Class I

U-box

404

45,725.64

5.66

Nucleus

StU-box 38

Class II

U-box and ARM

1046

117,247.83

5.86

Nucleus

StU-box 39

Class I

U-box

772

85,252.48

5.35

Nucleus

StU-box 40

Class II

U-box and ARM

692

76,220.66

8.77

Nucleus

StU-box 41

Class III

U-box and kinase

847

94,823.40

6.38

Nucleus

StU-box 42

Class II

U-box and ARM

650

70,580.83

7.85

Nucleus

StU-box 43

Class II

U-box and ARM

560

61,642.57

6.52

Nucleus,

StU-box 44

Class II

U-box and ARM

821

89,688.53

5.92

Nucleus

StU-box 45

Class I

U-box

428

46,916.19

5.01

Nucleus

StU-box 46

Class IV

U-box and Ufd2p

1019

115,679.95

5.17

Nucleus

StU-box 47

Class I

U-box

421

47,863.21

8.88

Nucleus

StU-box 48

Class II

U-box and ARM

661

72,292.86

5.54

Nucleus

StU-box 49

Class II

U-box and ARM

679

74,427.39

7.14

Nucleus

StU-box 50

Class IV

U-box and WD40

1040

116,153.41

5.62

Nucleus

StU-box 51

Class IV

U-box and WD40

1284

144,291.39

5.53

Nucleus

StU-box 52

Class IV

U-box and kinase and usp

745

83,678.15

6.29

Cell membrane, Chloroplast,Cytoplasm, Nucleus

StU-box 53

Class I

U-box

1015

111,985.43

5.60

Cytoplasm, Nucleus

StU-box 54

Class II

U-box and ARM

778

85,362.50

6.18

Nucleus

StU-box 55

Class I

U-box

449

49,970.89

8.87

Nucleus

StU-box 56

Class I

U-box

347

39,282.24

7.32

Nucleus

StU-box 57

Class I

U-box

420

46,905.47

8.76

Nucleus

StU-box 58

Class IV

U-box and kinase and usp

664

72,580.90

6.01

Nucleus

StU-box 59

Class I

U-box

404

45,641.31

8.92

Nucleus

StU-box 60

Class II

U-box and ARM

624

68,010.07

5.43

Nucleus

StU-box 61

Class III

U-box and kinase

557

63,507.13

6.08

Nucleus

StU-box 62

Class II

U-box and ARM

645

72,832.57

5.45

Cytoplasm, Nucleus

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