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Table 2 Model availability and quality assessment of built fungal ACCD protein models

From: Structural heterogeneity assessment among the isoforms of fungal 1-aminocyclopropane-1-carboxylic acid (ACC) deaminase: a comparative in silico perspective

NCBI accession no. Model availability Quality scores Distribution of amino acid residues in Ramachandran plot (%)
Model designation PMDB ID QMEAN score MolProbity score SAVES ERRAT overall quality factor (%) Favored region Outlier region
GAT21043.1 ACCNK1.pdb PM0083418 −0.74 1.37 91.061 93.62 0.72
GAT27758.1 ACCNK2.pdb PM0083419 −5.02 2.20 79.739 83.93 5.96
EJP66687.1 ACCNK3.pdb PM0083420 −0.91 1.71 91.512 92.66 1.05
OAT08481.1 ACCNK4.pdb PM0083421 −5.49 2.32 91.241 88.99 2.20
PVH83040.1 ACCNK5.pdb PM0083422 −1.52 1.66 91.730 93.30 1.04
EFW22190.1 ACCNK6.pdb PM0083423 −1.62 1.78 93.865 91.84 1.78
KLT38949.1 ACCNK7.pdb PM0083424 −1.18 1.50 91.988 94.61 1.35
ODV73361.1 ACCNK8.pdb PM0083425 −0.38 1.34 95.173 94.38 0.15
KAF4502930.1 ACCNK9.pdb PM0083426 −1.83 1.91 90.417 92.42 2.42
KAF4341290.1 ACCNK10.pdb PM0083427 −2.59 2.05 91.209 89.76 2.45
KAF5711901.1 ACCNK11.pdb PM0083428 −2.71 1.58 93.924 92.68 1.56
KAF5575056.1 ACCNK12.pdb PM0083429 −3.68 2.23 84.501 91.13 2.33
KAF5608299.1 ACCNK13.pdb PM0083430 −2.42 1.42 90.972 93.36 1.34
EPQ52735.1 ACCNK14.pdb PM0083431 −1.84 1.63 91.706 93.77 0.91
TFK49889.1 ACCNK15.pdb PM0083432 −1.94 1.75 91.732 93.92 0.76
EFZ03237.2 ACCNK16.pdb PM0083433 −1.53 1.64 95.846 92.81 1.05
ORY23702.1 ACCNK17.pdb PM0083434 −1.07 1.73 91.641 92.09 0.60
BAA92150.1 ACCNK18.pdb PM0083435 −1.67 1.72 93.243 91.06 1.32
ACX94231.1 ACCNK19.pdb PM0083436 −1.28 1.58 94.479 93.45 0.45
OPB41314.1 ACCNK20.pdb PM0083437 −1.34 1.45 94.939 93.11 0.75
OTA00990.1 ACCNK21.pdb PM0083438 −1.25 1.87 87.982 92.46 0.87
ETR99335.1 ACCNK22.pdb PM0083439 −1.56 1.81 93.016 92.88 1.31
KAB2568978.1 ACCNK23.pdb PM0083476 −1.05 1.14 93.568 94.16 0.75
KAF4843259.1 ACCNK24.pdb PM0083477 −3.09 1.91 91.692 88.74 2.63
KAF4859186.1 ACCNK25.pdb PM0083478 −3.09 1.91 91.692 88.74 2.63
KAF4912760.1 ACCNK26.pdb PM0083479 −3.08 1.80 86.696 90.64 3.07
KAF5133260.1 ACCNK27.pdb PM0083480 −2.53 1.79 92.447 91.72 0.87
KAF5497895.1 ACCNK28.pdb PM0083481 −2.71 1.71 92.163 91.09 2.51
KAF5520538.1 ACCNK29.pdb PM0083482 −2.53 1.71 91.304 89.83 2.65
KAF8206788.1 ACCNK30.pdb PM0083483 −1.72 1.69 93.151 93.45 0.89
OCT54425.1 ACCNK31.pdb PM0083484 −1.79 1.72 94.578 92.59 1.16
QLI64837.1 ACCNK32.pdb PM0083485 −2.19 1.60 90.505 92.65 1.03
TDZ14842.1 ACCNK33.pdb PM0083486 −2.03 2.06 83.630 89.12 1.36
TDZ62044.1 ACCNK34.pdb PM0083487 −1.58 1.62 86.613 91.84 1.21
TEA11173.1 ACCNK35.pdb PM0083488 −1.43 1.93 87.835 90.23 1.49
TVY45189.1 ACCNK36.pdb PM0083489 −2.87 2.05 86.982 88.62 2.59
TVY66286.1 ACCNK37.pdb PM0083490 −2.76 2.34 89.953 90.67 2.45
TVY83566.1 ACCNK38.pdb PM0083491 −4.84 2.02 88.015 91.84 2.13
XP_036495011.1 ACCNK39.pdb PM0083492 −2.71 1.71 92.163 91.09 2.51
XP_037178185.1 ACCNK40.pdb PM0083493 −2.53 1.73 91.304 89.83 2.65