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Table 4 Binding affinities and interactions of top ten ligands against nsp15

From: Anti-HIV reverse transcriptase plant polyphenolic natural products with in silico inhibitory properties on seven non-structural proteins vital in SARS-CoV-2 pathogenesis

Target

Cpd

Binding affinity (kcal/mol)

Hydrogen bonds

Other interactions

nsp15

15

āˆ’ā€‰8.6

Met243

Met243, Tyr262, Glu258, His362, Ala256

4

āˆ’ā€‰8.5

None

Lys281, Glu285, Tyr262, Met243

1

āˆ’ā€‰8.4

Gly254

Met243, Ala256, Glu258

25

āˆ’ā€‰8.1

Phe265, Ser266

Lys281, Ser266, Ala256

23

āˆ’ā€‰8

None

Glu258, Ala256, Gly263, Asp264, Phe265

26

āˆ’ā€‰7.8

Glu285, Glu364

Ala256, Ser266, Met243, Lys281, Glu285

12

āˆ’ā€‰7.7

Glu285

Ala256, Met243, Tyr262, Lys281

14

āˆ’ā€‰7.7

Arg282

Glu285, Lys281, Phe265

13

āˆ’ā€‰7.3

Gly263, Asp264

Ala256, His259, Asp264, Met243, Glu285

17

āˆ’ā€‰7.3

Glu258

None