Table 2 Isolates of Fusarium oxysporum, soilborne fungi, and oomycetes used in this study and amplifications by different primer pairs
From: Development of specific primers for Fusarium oxysporum causing damping off of Lilium formolongi
Species of isolates | Host plants | Origin | Others | Designed primer pairs | |||||
|---|---|---|---|---|---|---|---|---|---|
F1/R12) | F1/R2 | F2/R1 | F2/R2 | F3/R1 | F3/R2 | ||||
F. oxysporum f.sp. lilii | Lily | Netherlands | CBS 1303221) | + 3) | + | + | – | + | + |
F. oxysporum f.sp. gladioli | Gladiolus | Japan | MAFF305610 | – | – | – | – | – | – |
F. oxysporum f.sp. tulipae | Tulip | Japan | MAFF235105 | – | – | – | – | – | – |
F. oxysporum f.sp. cucumerinum | Cucumber | Aomori, Japan | – | – | – | – | ― | – | – |
F. oxysporum f.sp. lycopersici r.1 | Tomato | Japan | MAFF103037 | – | – | – | – | – | – |
F. oxysporum f. sp. lycopersici r.2 | Tomato | Japan | MAFF238899 | – | – | – | – | – | – |
F. oxysporum f.sp. melonis | Melon | Japan | MAFF239211 | – | – | – | – | – | – |
F. oxysporum f.sp. melonis | Melon | Japan | MAFF305544 | – | – | – | – | – | – |
F. oxysporum f.sp. fragariae | Strawberry | Akita, Japan | No. 1 | – | – | – | – | – | – |
F. oxysporum f.sp. fragariae | Strawberry | Akita, Japan | No. 2 | – | – | – | – | – | – |
Fusarium oxysporum f. sp. radicis-lycopersici | Tomato | Japan | MAFF103044 | – | – | – | – | – | – |
Fusarium oxysporum f. sp. raphani | Radish | Japan | MAFF103057 | – | – | – | – | – | – |
Fusarium oxysporum f. sp. spinaciae | Spinach | Japan | MAFF103059 | – | – | – | – | – | – |
Fusarium oxysporum f. sp. dianthi | Carnation | Japan | MAFF103072 | – | – | – | – | – | – |
Fusarium oxysporum f. sp. rapae | Turnip leaf | Japan | MAFF240321 | – | – | – | – | – | – |
Botrytis tulipae | Tulip | Japan | MAFF245223 | – | – | – | – | – | – |
Botrytis sp. | Korean ginseng | Japan | – | – | – | – | – | – | – |
Rhizopus stolonifer | Pandanus sp. | Japan | MAFF238790 | – | – | – | – | – | – |
Cylindrocarpon destructans | Strawberry | Japan | MAFF306591 | – | – | – | – | – | – |
Penicillium sp. | Ornithogalum sp. | Japan | – | – | – | – | – | – | – |
Rhizoctonia solani AG-4 | Unknown | Japan | – | – | – | – | – | – | – |
Sclerotium rolfsii | Tomato | Japan | – | – | – | – | – | – | – |
Calonectoria ilicicola | Soybean | Japan | – | – | – | – | – | – | – |
Verticillium dahliae | Egg plant | Japan | – | – | – | – | – | – | – |
Phytophthora nicotianae | Chinese chive | Japan | MAFF238148 | – | – | – | – | – | – |
Phytophthora cactorum | Strawberry | USA | MAFF306274 | – | – | – | – | – | – |
Phytophthora sojae | Soybean | Japan | MAFF235802 | – | – | – | – | – | – |
Pythium dissotocum | Rice | Japan | – | – | – | – | – | – | – |
Pythium spinosum | Cucumber | Japan | – | – | – | – | – | – | – |