Table 3 In silico study of 15 shattering genes identified in B. juncea with their closest Arabidopsis homologs and sequence feature
Gene name | Gene locus | Chr. no | Closest Arabidopsis homolog | Protein length | Mol. wt.(kda) | PI | Introns |
|---|---|---|---|---|---|---|---|
BrjS18 | BjuB022348 | B06 | SHP1/AGL1 | 278aa | 31.74 | 8.49 | 6 |
BrjS19 | BjuB022350 | B06 | SHP1/AGL1 | 247aa | 28.20 | 9.11 | 6 |
BrjS20 | BjuB001727 | B01 | SHP2/AGL5 | 244aa | 28.00 | 9.12 | 5 |
BrjS21 | BjuB027201 | B04 | FUL/AGL8 | 159aa | 18.50 | 9.62 | 4 |
BrjS22 | BjuB037752 | B02 | FUL/AGL8 | 301aa | 34.82 | 9.08 | 7 |
BrjS23 | BjuB020848 | B06 | ALC/AT5G67110/BHLH73 | 222aa | 24.59 | 9.62 | 4 |
BrjS24 | BjuA011758 | A07 | ALC/AT5G67110/BHLH73 | 214aa | 23.41 | 9.37 | 4 |
BrjS25 | BjuB019604 | B08 | IND/EDA33/GT10 | 191aa | 21.62 | 5.97 | 0 |
BrjS26 | BjuB019326 | B08 | IND/EDA33/GT10 | 191aa | 21.59 | 5.97 | 0 |
BrjS27 | BjuA038017 | A10 | NAC/At5g22380/MWD9.18 | 285aa | 32.25 | 6.91 | 2 |
BrjS28 | BjuB030790 | B03 | NAC/At5g22380/MWD9.18 | 293aa | 32.96 | 6.46 | 2 |
BrjS29 | BjuB001605 | B08 | BLH9/RPL/BLR/LSN/PNY | 577aa | 62.00 | 8.85 | 3 |
BrjS30 | BjuA040195 | A10 | BLH9/RPL/BLR/LSN/PNY | 586aa | 63.15 | 6.95 | 3 |
BrjS31 | BjuA029936 | A08 | PG/At1g45015 | 420aa | 43.74 | 7.96 | 3 |
BrjS32 | BjuB032977 | B03 | PG/At1g45015 | 421aa | 43.74 | 7.93 | 2 |