Skip to main content

Table 4 Structural similarity (Dali Z-scores)/root mean squared deviation (RMSD) matrix of the protein homologs from DCL protein subfamilies in A. thaliana

From: Comparative phylogeny and evolutionary analysis of Dicer-like protein family in two plant monophyletic lineages

  DCL2 AEE73925.1 A. protothecoides DCL3 AEE77842.1 DCL4 NP001190348 DCL1 AE202177.1 DCL3 NP001154662.2 DCL4 NP197532.3 DCL4 AED92830
Z scores RMSD (Å) Z scores RMSD (Å) Z scores RMSD (Å) Z scores RMSD (Å) Z scores RMSD (Å) Z scores RMSD (Å) Z scores RMSD (Å) Z scores RMSD (Å)
DCL2 AEE73925.1 60.1 0.0               
Auxenochlorella protothecoides 31.4 3.8 59.3 0.0             
DCL3 AEE77842.1 17.3 8.3 14.9 16.8 61.0 0.0           
DCL4 NP001190348 18.6 7.6 13.6 18.2 29.2 11.7 60.4 0.0         
DCL1 AE202177.1 21.4 13.4 16.8 17.0 30.8 25.6 35.7 28.6 62.1 0.0       
DCL3 NP001154662.2 19.5 8.1 15.6 19.8 39.0 6.8 36.9 16.8 40.4 18.5 59.1 0.0     
DCL4 NP197532.3 16.9 6.9 16.6 18.0 29.9 11.8 36.0 4.2 38.3 19.3 43.0 10.8 61.2 0.0   
DCL4 AED92830 16.9 6.9 16.6 18.0 29.9 11.6 36.0 4.2 38.3 19.1 43.0 10.8 61.2 0.0 61.2 0.0