Table 2 Estimated physiochemical properties and contents of the secondary structure of Nigrocin-PN, -M1, and -M2 in different solutions
From: A novel antimicrobial peptide found in Pelophylax nigromaculatus
Hydrophobicity (H) | Hydrophobic moment (µH) | Net charge (Z) | α-helix (in NH4AC/in TFE) | β-sheet (in NH4AC/in TFE) | Random coil (in NH4AC/in TFE) | |
|---|---|---|---|---|---|---|
Nigrocin-PN | 0.549 | 0.434 | + 3 | 0.03/0.73 | 0.20/0.03 | 0.77/0.24 |
Nigrocin-M1 | 0.558 | 0.427 | + 3 | 0.07/1.00 | 0.08/0.00 | 0.85/0.00 |
Nigrocin-M2 | 0.511 | 0.565 | + 3 | 0.01/0.99 | 0.01/0.00 | 0.98/0.01 |