Table 2 Annealing temperature (Ta), number of polymorphic bands (PB), and polymorphic information content (PIC) for primer/primer combinations in IRAP study
Marker | Ta (°C) | PB | PIC | |||
|---|---|---|---|---|---|---|
Azerbaijan | Golestan | Guilan | Mazandaran | |||
3′LTR | 60 | 11 | 15 | 16 | 18 | 0.49 |
5′LTR1 | 65 | 26 | 24 | 28 | 30 | 0.49 |
Sukkula | 60 | 6 | 7 | 6 | 7 | 0.46 |
Nikkita | 58 | 26 | 28 | 28 | 27 | 0.49 |
LTR6149 | 60 | 9 | 8 | 10 | 8 | 0.36 |
3′LTR +5′LTR1 | 60 | 13 | 16 | 16 | 17 | 0.49 |
3′LTR + Sukkula | 64 | 11 | 12 | 13 | 16 | 0.46 |
3′LTR + LTR6149 | 60 | 16 | 18 | 18 | 20 | 0.48 |
5'LTR1 + LTR6150 | 62 | 26 | 22 | 19 | 35 | 0.49 |
Sukkula + LTR6149 | 64 | 11 | 12 | 12 | 12 | 0.48 |
Sukkula + LTR6150 | 64 | 20 | 22 | 21 | 22 | 0.50 |
Nikkita + LTR6149 | 64 | 7 | 7 | 6 | 6 | 0.45 |
Total | - | 182 | 191 | 193 | 218 | - |
Average | - | 15.17 | 15.92 | 16.08 | 18.17 | 0.47 |