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Table 5 MspI cutting sites and fragment sizes for gene body regions

From: In silico analysis of promoter regions to identify regulatory elements in TetR family transcriptional regulatory genes of Mycobacterium colombiense CECT 3035

Name of corresponding body region

Nucleotide positions of MspI sites

Fragment sizes

MCOL_RS11660

Multiple (23, 41, 53, 127, 152, 162, 189, 241, 374, 378, 432, 450, 517)

74, 52, 133, 54, 67

MCOL_RS11090

Multiple (124, 193, 231, 340)

69, 109

MCOL_RS08825

Multiple (9, 130, 155, 240, 361, 395, 529)

121, 85, 134

MCOL_RS08145

Multiple (130, 243, 360)

113, 117

MCOL_RS06375

Multiple (4, 35, 182, 540)

147

MCOL_RS04605

Multiple (121, 267, 542)

146

MCOL_RS03660

Multiple (109, 152, 227, 448, 557, 566)

43, 75, 109

MCOL_RS02905

Multiple (98, 275, 286, 303)

177

MCOL_RS02170

Multiple (306, 431, 464, 565)

125, 101

MCOL_RS26110

Multiple (288, 420, 446, 458)

132

MCOL_RS07580

Multiple (74, 133, 158, 200, 459, 554, 586, 616)

59, 42, 95

MCOL_RS05990

Multiple (185, 274, 539)

89

MCOL_RS23260

Multiple (4, 118, 214, 225, 263, 276, 280, 320, 369, 519, 541)

114, 96, 40, 49, 150

MCOL_RS22650

Multiple (16, 23, 39, 43, 261, 361, 442, 592, 603)

218, 55, 81, 150

MCOL_RS17010

Multiple (29, 231, 310, 388, 445, 524, 540)

202, 79, 78, 57, 79

MCOL_RS03070

Multiple (95, 189, 203, 292, 311, 440, 484, 608, 643, 652)

94, 89, 129, 44, 124

MCOL_RS04305

Multiple (20, 278, 377, 394, 485, 489)

99, 91

MCOL_RS22305

Multiple (243, 540)

-

MCOL_RS20235

Multiple (27, 52, 140, 149, 274, 382, 459, 493, 518, 558, 613, 624)

88, 125, 108, 77, 40, 55

MCOL_RS25615

Multiple (14, 113, 133, 387, 480, 607)

99, 93, 127

MCOL_RS15085

Multiple (68, 127, 246, 310, 367, 401, 459, 505, 529, 566)

59, 119, 64, 57, 58, 46

MCOL_RS13375

Multiple (49, 57, 106, 183, 291, 296, 396, 440, 466, 598, 604)

49, 77, 108, 100, 132