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Table 2 Identified common motifs in gene promoter regions and number of binding sites

From: In silico analysis of promoter regions to identify regulatory elements in TetR family transcriptional regulatory genes of Mycobacterium colombiense CECT 3035

Discovered motif

Number (%) of CECT 3035 promoters containing the motifs

E valuea

Motif width

Total no. of binding sites

MTF 1

22 (100%)

1.1e-013

29

22

MTF 2

21 (95.45%)

3.0e-007

29

21

MTF 3

22 (100%)

6.8e-006

21

22

MTF 4

21 (95.45%)

1.5e-003

15

21

MTF 5

22 (100%)

1.8e-001

15

22

  1. MTF motif
  2. aProbability of finding an equally well conserved motif in random sequences