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Table 4 BLAST corresponding Solyc (Solanum lycopersicum) gene sequences and annotation for SSR marker sequences

From: Exploring genetic variation among Jordanian Solanum lycopersicon L. landraces and their performance under salt stress using SSR markers

SSR name Solyc gene Annotation result
LEaat002 Solyc07g007120 Transcription factor MEIS1 and related HOX domain protein HOMEOBOX PROTEIN KNOTTED-1-LIKE 3-RELATED; contains Interpro domain(s) IPR005539 (ELK domain), IPR001356 (Homeobox domain), IPR009057 (Homeodomain-like), IPR005541 (KNOX2), IPR005540 (KNOX1), IPR008422 (Homeobox KN domain)
LEaat006 Solyc03g020010 Trypsin and protease inhibitor (Kunitz_legume); contains Interpro domain(s) IPR002160 (Proteinase inhibitor I3, Kunitz legume) and IPR011065 (Kunitz inhibitor ST1-like)
LEaat008 Solyc07g007120.2 Transcription factor MEIS1 and related HOX domain protein HOMEOBOX PROTEIN KNOTTED-1-LIKE 3-RELATED; contains Interpro domain(s) IPR005539 (ELK domain), IPR001356 (Homeobox domain), IPR009057 (Homeodomain-like), IPR005541 (KNOX2), IPR005540 (KNOX1), IPR008422 (Homeobox KN domain)
LEga003 Solyc09g010970 Carbonic anhydrase (EC 4.2.1.1); contains Interpro domain(s) IPR001765 carbonic anhydrases
LEta019 Solyc09g042380 L. esculentum microsatellite repeat DNA region Unknown Protein (AHRD V1)