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Table 4 BLAST corresponding Solyc (Solanum lycopersicum) gene sequences and annotation for SSR marker sequences

From: Exploring genetic variation among Jordanian Solanum lycopersicon L. landraces and their performance under salt stress using SSR markers

SSR name

Solyc gene

Annotation result

LEaat002

Solyc07g007120

Transcription factor MEIS1 and related HOX domain protein HOMEOBOX PROTEIN KNOTTED-1-LIKE 3-RELATED; contains Interpro domain(s) IPR005539 (ELK domain), IPR001356 (Homeobox domain), IPR009057 (Homeodomain-like), IPR005541 (KNOX2), IPR005540 (KNOX1), IPR008422 (Homeobox KN domain)

LEaat006

Solyc03g020010

Trypsin and protease inhibitor (Kunitz_legume); contains Interpro domain(s) IPR002160 (Proteinase inhibitor I3, Kunitz legume) and IPR011065 (Kunitz inhibitor ST1-like)

LEaat008

Solyc07g007120.2

Transcription factor MEIS1 and related HOX domain protein HOMEOBOX PROTEIN KNOTTED-1-LIKE 3-RELATED; contains Interpro domain(s) IPR005539 (ELK domain), IPR001356 (Homeobox domain), IPR009057 (Homeodomain-like), IPR005541 (KNOX2), IPR005540 (KNOX1), IPR008422 (Homeobox KN domain)

LEga003

Solyc09g010970

Carbonic anhydrase (EC 4.2.1.1); contains Interpro domain(s) IPR001765 carbonic anhydrases

LEta019

Solyc09g042380

L. esculentum microsatellite repeat DNA region Unknown Protein (AHRD V1)