Table 2 Predicted conserved motifs in 20 sequences of Phytochrome A gene
From: Phylogenetic analysis of phytochrome A gene from Lablab purpureus (L.) Sweet
Sequence | Length | Start | P-value | Sites | ||
|---|---|---|---|---|---|---|
Ad_PHYA | 2054 | 1598 | 5.50×10−8 | AGATGGGGTG | GTGCAAAGCATG | ACCCTGGTGA |
Ah_PHYA | 2057 | 884 | 5.50×10−8 | GTTGATTGTC | GTGCAAAGCATG | TGAAGGTGCT |
Ai_PHYA | 2057 | 884 | 5.50×10−8 | GTTGATTGTC | GTGCAAAGCATG | TGAAGGTGCT |
Ap_PHYA | 2073 | 896 | 5.50×10−8 | GTTGATTGTC | GTGCAAAGCATG | TGAAAGTCCT |
At_PHYA | 2057 | 1601 | 1.42×10−7 | AGATGGGGAG | GTGCAAAGCATG | ATCCAGATGA |
Cc_PHYA | 2076 | 896 | 5.50×10−8 | GTTGATTGTC | GTGCAAAGCATG | TTAAGGTGCT |
Gm_PHYA1 | 2077 | 1589 | 5.50×10−8 | CGATGGGGTG | GTGCAAAGCATG | AGGCTGGAGA |
Gm_PHYA2 | 2072 | 1589 | 5.50×10−8 | CGATGGGGTG | GTGCAAAGCATG | AGGCTGGAGA |
Gm_PHYA3_E3 | 2077 | 899 | 5.50×10−8 | GTTGATTGTT | GTGCAAAGCATG | TGAATGTGCT |
Gm_PHYA3_e3 | 2077 | 899 | 5.50×10−8 | GTTGATTGTT | GTGCAAAGCATG | TGAATGTGCT |
Gs_PHYA2 | 2056 | 1595 | 5.50×10−8 | CGATGGGGTG | GTGCAAAGCATG | AAGCTGGAGA |
La_PHYA | 2063 | 454 | 5.50×10−8 | CGCTGGGGTG | GTGCAAAGCATG | AACCTGGTGA |
Lj_PHYA | 2059 | 1598 | 5.50×10−8 | CGATGGGGTG | GTGCAAAGCATG | AACCTGGAGA |
Lpr_PHYA3 | 2077 | 902 | 5.50×10−8 | GTTGATTGTC | GTGCAAAGCATG | TGAAGGTGCT |
Ls_PHYA | 2059 | 1598 | 5.50×10−8 | CGATGGGGTG | GTGCAAAGCATG | AACCGGGCGA |
Pp_PHYA | 474 | 26 | 3.18×10−7 | GTTGATTGTC | GCGCAAAGCATC | TGAAGGTTCT |
Ps_PHYA | 2056 | 1598 | 5.50×10−8 | CGATGGGGTG | GTGCAAAGCATG | AACCGGGCGA |
Va_PHYA | 2079 | 902 | 5.50×10−8 | GTTGATTGTC | GTGCAAAGCATG | TGAAGGTGCT |
Vr_PHYA | 2051 | 1595 | 5.50×10−8 | CGATGGGGTG | GTGCAAAGCATG | AAGCTGGAGA |
Vu_PHYA | 2079 | 902 | 5.50×10−8 | GTTGATTGTC | GTGCAAAGCATG | TGAAGGTTCT |