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Table 1 Physicochemical characterization of ACC deaminase proteins of selected fungal strains

From: Structural heterogeneity assessment among the isoforms of fungal 1-aminocyclopropane-1-carboxylic acid (ACC) deaminase: a comparative in silico perspective

Fungal strain NCBI accession no. Sequence length Molecular weight (KDa) Isoelectric point (pI) Extinction coefficient (EC) (M− 1 cm− 1) Instability index (II) Aliphatic index (AI) Grand average of hydropathicity (GRAVY) Total number of negatively charged residue (TNR) Total number of positively charged residue (TPR)
Aspergillus luchuensis GAT21043.1 370 40.14 6.28 45,045 39.35 81.49 − 0.319 44 41
Aspergillus luchuensis GAT27758.1 454 49.48 6.34 38,975 43.05 82.25 −0.454 50 44
Beauveria bassiana ARSEF 2860 EJP66687.1 346 37.19 5.70 33,140 29.91 87.80 −0.060 39 33
Blastomyces gilchristii SLH14081 OAT08481.1 275 29.66 10.06 38,055 53.58 65.67 −0.628 21 38
Cadophora sp. DSE1049 PVH83040.1 348 37.51 5.84 35,660 28.96 85.52 −0.168 45 39
Coccidioides posadasii str. Silveira EFW22190.1 350 37.90 6.03 41,495 31.66 90.97 −0.181 44 39
Cutaneotrichosporon oleaginosum KLT38949.1 344 36.32 6.19 23,505 30.08 90.26 0.005 38 35
Cyberlindnera jadinii NRRL Y-1542 ODV73361.1 344 37.36 6.09 25,245 32.52 86.77 −0.170 41 37
Fusarium agapanthi KAF4502930.1 340 36.14 6.25 26,025 35.39 98.15 −0.044 37 35
Fusarium beomiforme KAF4341290.1 342 36.40 6.61 27,515 28.42 94.74 −0.073 35 34
Fusarium mundagurra KAF5711901.1 631 69.16 6.04 66,725 38.28 92.00 −0.196 73 63
Fusarium pseudocircinatum KAF5575056.1 379 40.98 6.10 32,890 26.40 96.52 −0.012 41 34
Fusarium subglutinans KAF5608299.1 750 82.47 6.06 90,800 39.20 90.77 −0.211 81 67
Gloeophyllum trabeum ATCC 11539 EPQ52735.1 346 36.60 6.51 30,160 28.62 96.76 0.021 37 35
Heliocybe sulcata TFK49889.1 339 36.24 6.76 34,045 28.67 99.59 0.035 34 33
Metarhizium robertsii ARSEF 23 EFZ03237.2 347 37.06 6.12 31,525 34.67 91.73 −0.023 39 36
Naematelia encephala ORY23702.1 350 37.00 6.08 30,495 24.63 92.29 −0.043 36 32
Penicillium citrinum BAA92150.1 360 39.17 5.56 42,985 33.16 83.25 −0.276 45 37
Trichoderma asperellum ACX94231.1 348 37.06 5.77 31,525 26.35 94.86 0.019 40 35
Trichoderma guizhouense OPB41314.1 345 36.64 5.77 31,525 25.72 94.52 0.011 39 34
Trichoderma parareesei OTA00990.1 359 37.87 5.94 26,025 31.26 90.03 −0.033 40 36
Trichoderma reesei RUT C-30 ETR99335.1 358 38.00 5.64 26,025 31.73 89.72 −0.077 42 36
Lasiodiplodia theobromae KAB2568978.1 339 36.63 5.65 29,255 30.44 82.60 −0.233 44 38
Colletotrichum siamense KAF4843259.1 375 40.37 7.76 37,025 38.96 97.23 −0.035 37 38
Colletotrichum siamense KAF4859186.1 375 40.37 7.76 37,025 38.96 97.23 −0.035 37 38
Colletotrichum viniferum KAF4912760.1 368 39.66 5.95 38,765 33.76 93.04 −0.138 40 34
Metarhizium anisopliae KAF5133260.1 358 38.51 6.85 30,035 37.19 89.41 −0.134 41 40
Colletotrichum siamense KAF5497895.1 368 39.60 6.01 33,265 37.32 95.95 −0.117 39 44
Colletotrichum aenigma KAF5520538.1 368 39.55 6.01 33,265 39.21 93.04 −0.166 40 35
Mycena galopus ATCC 62051 KAF8206788.1 352 37.69 6.01 38,640 27.39 94.32 0.033 40 35
Cladophialophora carrionii OCT54425.1 367 39.30 6.56 29,005 33.79 94.50 −0.122 42 40
Metarhizium brunneum QLI64837.1 362 38.92 7.20 30,035 36.78 88.70 −0.130 40 40
Colletotrichum orbiculare MAFF 240422 TDZ14842.1 340 36.22 6.46 26,025 27.80 98.76 0.039 38 37
Colletotrichum trifolii TDZ62044.1 340 36.05 6.46 26,025 24.54 95.91 0.029 37 36
Colletotrichum sidae TEA11173.1 311 33.02 5.55 24,410 23.82 100.13 0.059 37 33
Lachnellula occidentalis TVY45189.1 357 38.76 8.78 30,035 40.52 88.82 −0.287 37 41
Fusarium oxysporum f. sp. cubense TVY66286.1 340 35.92 6.55 27,515 31.95 96.79 −0.030 36 35
Lachnellula suecica TVY83566.1 149 16.18 4.76 13,075 33.92 86.38 −0.133 21 16
Colletotrichum siamense XP_036495011.1 368 39.60 6.01 33,265 37.32 95.95 −0.117 39 34
Colletotrichum aenigma XP_037178185.1 368 39.55 6.01 33,265 39.21 93.04 −0.166 40 35