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Table 1 Physicochemical characterization of ACC deaminase proteins of selected fungal strains

From: Structural heterogeneity assessment among the isoforms of fungal 1-aminocyclopropane-1-carboxylic acid (ACC) deaminase: a comparative in silico perspective

Fungal strain

NCBI accession no.

Sequence length

Molecular weight (KDa)

Isoelectric point (pI)

Extinction coefficient (EC) (M− 1 cm− 1)

Instability index (II)

Aliphatic index (AI)

Grand average of hydropathicity (GRAVY)

Total number of negatively charged residue (TNR)

Total number of positively charged residue (TPR)

Aspergillus luchuensis

GAT21043.1

370

40.14

6.28

45,045

39.35

81.49

− 0.319

44

41

Aspergillus luchuensis

GAT27758.1

454

49.48

6.34

38,975

43.05

82.25

−0.454

50

44

Beauveria bassiana ARSEF 2860

EJP66687.1

346

37.19

5.70

33,140

29.91

87.80

−0.060

39

33

Blastomyces gilchristii SLH14081

OAT08481.1

275

29.66

10.06

38,055

53.58

65.67

−0.628

21

38

Cadophora sp. DSE1049

PVH83040.1

348

37.51

5.84

35,660

28.96

85.52

−0.168

45

39

Coccidioides posadasii str. Silveira

EFW22190.1

350

37.90

6.03

41,495

31.66

90.97

−0.181

44

39

Cutaneotrichosporon oleaginosum

KLT38949.1

344

36.32

6.19

23,505

30.08

90.26

0.005

38

35

Cyberlindnera jadinii NRRL Y-1542

ODV73361.1

344

37.36

6.09

25,245

32.52

86.77

−0.170

41

37

Fusarium agapanthi

KAF4502930.1

340

36.14

6.25

26,025

35.39

98.15

−0.044

37

35

Fusarium beomiforme

KAF4341290.1

342

36.40

6.61

27,515

28.42

94.74

−0.073

35

34

Fusarium mundagurra

KAF5711901.1

631

69.16

6.04

66,725

38.28

92.00

−0.196

73

63

Fusarium pseudocircinatum

KAF5575056.1

379

40.98

6.10

32,890

26.40

96.52

−0.012

41

34

Fusarium subglutinans

KAF5608299.1

750

82.47

6.06

90,800

39.20

90.77

−0.211

81

67

Gloeophyllum trabeum ATCC 11539

EPQ52735.1

346

36.60

6.51

30,160

28.62

96.76

0.021

37

35

Heliocybe sulcata

TFK49889.1

339

36.24

6.76

34,045

28.67

99.59

0.035

34

33

Metarhizium robertsii ARSEF 23

EFZ03237.2

347

37.06

6.12

31,525

34.67

91.73

−0.023

39

36

Naematelia encephala

ORY23702.1

350

37.00

6.08

30,495

24.63

92.29

−0.043

36

32

Penicillium citrinum

BAA92150.1

360

39.17

5.56

42,985

33.16

83.25

−0.276

45

37

Trichoderma asperellum

ACX94231.1

348

37.06

5.77

31,525

26.35

94.86

0.019

40

35

Trichoderma guizhouense

OPB41314.1

345

36.64

5.77

31,525

25.72

94.52

0.011

39

34

Trichoderma parareesei

OTA00990.1

359

37.87

5.94

26,025

31.26

90.03

−0.033

40

36

Trichoderma reesei RUT C-30

ETR99335.1

358

38.00

5.64

26,025

31.73

89.72

−0.077

42

36

Lasiodiplodia theobromae

KAB2568978.1

339

36.63

5.65

29,255

30.44

82.60

−0.233

44

38

Colletotrichum siamense

KAF4843259.1

375

40.37

7.76

37,025

38.96

97.23

−0.035

37

38

Colletotrichum siamense

KAF4859186.1

375

40.37

7.76

37,025

38.96

97.23

−0.035

37

38

Colletotrichum viniferum

KAF4912760.1

368

39.66

5.95

38,765

33.76

93.04

−0.138

40

34

Metarhizium anisopliae

KAF5133260.1

358

38.51

6.85

30,035

37.19

89.41

−0.134

41

40

Colletotrichum siamense

KAF5497895.1

368

39.60

6.01

33,265

37.32

95.95

−0.117

39

44

Colletotrichum aenigma

KAF5520538.1

368

39.55

6.01

33,265

39.21

93.04

−0.166

40

35

Mycena galopus ATCC 62051

KAF8206788.1

352

37.69

6.01

38,640

27.39

94.32

0.033

40

35

Cladophialophora carrionii

OCT54425.1

367

39.30

6.56

29,005

33.79

94.50

−0.122

42

40

Metarhizium brunneum

QLI64837.1

362

38.92

7.20

30,035

36.78

88.70

−0.130

40

40

Colletotrichum orbiculare MAFF 240422

TDZ14842.1

340

36.22

6.46

26,025

27.80

98.76

0.039

38

37

Colletotrichum trifolii

TDZ62044.1

340

36.05

6.46

26,025

24.54

95.91

0.029

37

36

Colletotrichum sidae

TEA11173.1

311

33.02

5.55

24,410

23.82

100.13

0.059

37

33

Lachnellula occidentalis

TVY45189.1

357

38.76

8.78

30,035

40.52

88.82

−0.287

37

41

Fusarium oxysporum f. sp. cubense

TVY66286.1

340

35.92

6.55

27,515

31.95

96.79

−0.030

36

35

Lachnellula suecica

TVY83566.1

149

16.18

4.76

13,075

33.92

86.38

−0.133

21

16

Colletotrichum siamense

XP_036495011.1

368

39.60

6.01

33,265

37.32

95.95

−0.117

39

34

Colletotrichum aenigma

XP_037178185.1

368

39.55

6.01

33,265

39.21

93.04

−0.166

40

35