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Table 1 Identified TSSs and predictive score value for Trametes hirsuta strain 072

From: Investigation of promoter regions, motifs, and CpG islands in the regulation of gene expression in Trametes hirsuta strain 072

Name/gene ID Name of corresponding promoter region No. of TSSs Predictive score (at cutoff value 0.8) Distance from start codon (ATG)
atp9/36279644 Pro-36279644 2 0.98, 0.97 -74, -1221
nad3/36279640 Pro-36279640 2 0.94, 0.82 -801, -1309
nad2/36279639 Pro-36279639 3 1.00, 0.90, 0.88 -796, -1390, -1456
nad4/36279629 Pro-36279629 9 0.99, 0.96, 0.91,0.84, 0.98, 0.86,0.89, 0.92, 0.82 -3402, -3481, -3913, -4008, 617, -528, -2963, -3096, -4847
C7V85mgp08/36279625 Pro-36279625 5 0.99, 0.56, 0.86, 0.87, 0.81 -790, -1077, -1120, -953, -257
cox1/36279622 Pro-36279622 2 0.91, 0.85 -810, -310
Cob/36279616 Pro-36279616 3 0.98, 0.96, 0.92 -759, -737, -499,
nad1/36279614 Pro-36279614 6 0.99, 0.83, 0.95, 0.96, 0.94, 0.86 -1644, -1779, -2357, -1627, -1381, -607
atp8/36279610 Pro-36279610 5 0.99, 0.96, 0.91, 0.98, 0.98 -733, -934, -1131, -1394, -254
nad5/36279609 Pro-36279609 4 0.99, 0.86, 0.85, 0.94 -2760, -3044, -3261, -3739
nad4L/36279608 Pro-36279608 4 0.99, 0.86, 0.85, 0.94 -2493, -2777, -2994, -3472
cox3/36279607 Pro-36279607 5 0.99, 0.86, 0.85, 0.94, 0.91 -1324, -1608, -1825, -2303, -2940
C7V85mgp19/36279606 Pro-36279606 8 0.91, 1.00, 0.89, 0.94, 0.96,1.00, 0.83, 0.86 -443, -1055, -1526, -2204, -2619, -2698, -2706, -2776
atp6/36279604 Pro-36279604 6 0.84, 0.84, 1.00, 0.82, 0.85, 0.89 -1396, -2512, -2655, -2921, -3051, -3576
nad6/36279602 Pro-36279602 5 1.00, 0.84, 0.84, 0.82, 0.85 -413, -556, -822, -952, -1477
s3/36279601 Pro-36279601 3 0.99, 0.99, 0.84 -26, -1132, -2174
cox2/36279600 Pro-36279600 1 0.99 -980