Table 1 Identified TSSs and predictive score value for Trametes hirsuta strain 072
Name/gene ID | Name of corresponding promoter region | No. of TSSs | Predictive score (at cutoff value 0.8) | Distance from start codon (ATG) |
|---|---|---|---|---|
atp9/36279644 | Pro-36279644 | 2 | 0.98, 0.97 | -74, -1221 |
nad3/36279640 | Pro-36279640 | 2 | 0.94, 0.82 | -801, -1309 |
nad2/36279639 | Pro-36279639 | 3 | 1.00, 0.90, 0.88 | -796, -1390, -1456 |
nad4/36279629 | Pro-36279629 | 9 | 0.99, 0.96, 0.91,0.84, 0.98, 0.86,0.89, 0.92, 0.82 | -3402, -3481, -3913, -4008, 617, -528, -2963, -3096, -4847 |
C7V85mgp08/36279625 | Pro-36279625 | 5 | 0.99, 0.56, 0.86, 0.87, 0.81 | -790, -1077, -1120, -953, -257 |
cox1/36279622 | Pro-36279622 | 2 | 0.91, 0.85 | -810, -310 |
Cob/36279616 | Pro-36279616 | 3 | 0.98, 0.96, 0.92 | -759, -737, -499, |
nad1/36279614 | Pro-36279614 | 6 | 0.99, 0.83, 0.95, 0.96, 0.94, 0.86 | -1644, -1779, -2357, -1627, -1381, -607 |
atp8/36279610 | Pro-36279610 | 5 | 0.99, 0.96, 0.91, 0.98, 0.98 | -733, -934, -1131, -1394, -254 |
nad5/36279609 | Pro-36279609 | 4 | 0.99, 0.86, 0.85, 0.94 | -2760, -3044, -3261, -3739 |
nad4L/36279608 | Pro-36279608 | 4 | 0.99, 0.86, 0.85, 0.94 | -2493, -2777, -2994, -3472 |
cox3/36279607 | Pro-36279607 | 5 | 0.99, 0.86, 0.85, 0.94, 0.91 | -1324, -1608, -1825, -2303, -2940 |
C7V85mgp19/36279606 | Pro-36279606 | 8 | 0.91, 1.00, 0.89, 0.94, 0.96,1.00, 0.83, 0.86 | -443, -1055, -1526, -2204, -2619, -2698, -2706, -2776 |
atp6/36279604 | Pro-36279604 | 6 | 0.84, 0.84, 1.00, 0.82, 0.85, 0.89 | -1396, -2512, -2655, -2921, -3051, -3576 |
nad6/36279602 | Pro-36279602 | 5 | 1.00, 0.84, 0.84, 0.82, 0.85 | -413, -556, -822, -952, -1477 |
s3/36279601 | Pro-36279601 | 3 | 0.99, 0.99, 0.84 | -26, -1132, -2174 |
cox2/36279600 | Pro-36279600 | 1 | 0.99 | -980 |