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Table 2 Number and predictive score for glucan endo-1,3-beta-glucosidase genes of Solanum tuberosum cultivar DM 1-3 156 R44 TSSs

From: In silico analysis of promoter region and regulatory elements of glucan endo-1,3-beta-glucosidase encoding genes in Solanum tuberosum: cultivar DM 1-3 516 R44

Gene ID

Corresponding promoter region name

Number of TSS identified

Predictive score at a cutoff value of 0.8

Location of the best TSS upstream of the translation start site

ID102588651

Pro-102588651

1

0.99

−849

ID102594958

Pro-102594958

3

0.81, 0.84, 0.98

−277

ID102601393

Pro-102601393

1

0.94

−79

ID102595473

Pro-102595473

1

0.91

−724

ID102593331

Pro-102593331

1

0.98

−379

ID102578898

Pro-102578898

1

0.98

−2900

ID102583593

Pro-102583593

3

0.82, 0.84, 0.91

−79

ID102595860

Pro-102595860

1

0.94

−1579

ID102605560

Pro-102605560

2

0.81, 0.93

−522

ID102601178

Pro-102601178

1

0.90

−2125

ID102587248

Pro-102587248

1

0.91

−50

ID102604922

Pro-102604922

3

0.82, 0.93.1.00

−1402

ID102605428

Pro-102605428

1

0.88

−313

ID102596927

Pro-102596927

2

0.82, 0.99

−429

ID102583800

Pro-102583800

1

0.81

−348

ID102581946

Pro-102581946

1

1.00

−694

ID102578810

Pro-102578810

3

0.86, 0.94, 0.97

−1880

ID102595638

Pro-102595638

3

0.83, 0.85, 0.93

−751

ID102589208

Pro-102589208

1

0.87

−686

  1. aNNPP tool prediction result is considered reliable at 0.8 cutoff values for eukaryote organism [20]. Values in bold are the highest prediction scores for sequences having multiple TSS