Table 2 Comparison of Pi-ta protein sequences of 47 Sri Lankan rice accessions with wPi-ta (Tetep, GenBank accession number GQ918486.1) using Clustal W, Bioedit 7.2.5. Highlighted in black are the amino acids that contributed to the resistant phenotype due to the absence of the functional mutation at the 918th amino acid position
No | Accession name | IRGC No |
|
|---|---|---|---|
0 | wPita | QGLLSFFLSL PWLLSLPAMH LQPDLMIV | |
1 | Alagusamba | IRGC 8944-2 | QGLLSFFLSL PWLLSLP |
2 | Balasuriya | IRGC 66509-1 | QGLLSFFLSL PWLLSLPSMH LQPDLMIV |
3 | Chandina | IRGC 36420-1 | QGLLSFFLSL PWLLSLPSMH LQPDLMIV |
4 | Galawaka handeran | IRGC 31381-1 | QGLLSFFLSL PWLLSLPSMH LQPDLMIV |
5 | Godawel | IRGC 15750 | QGLLSFFLSL PWLLSLPSMH LQPDLMIV |
6 | Halsuduheenati | IRGC 15599-1 | QGLLSFFLSL PWLLSLPSMH LQPDLMIV |
7 | Heendikwee | IRGC 15587-2 | QGLLSFFLSL PWLLSLPSMH LQPDLMIV |
8 | Herath Banda | IRGC 67630-1 | QGLLSFFLSL PWLLSLPSMH LQPDLMIV |
9 | Honderawala | IRGC 47372-1 | QGLLSFFLSL PWLLSLP |
10 | Hodarawala | IRGC 67631-1 | QGLLSFFLSL LWLLSLPSMH LQPDLMIV |
11 | Kahatawee | IRGC 12004-1 | QGLLSFFLSL PWLLSLPSMH LQPDLMIV |
12 | Kalu Ilankayan | IRGC 36270-1 | QGLLSFFLSL PWLLSLPSMH LQPDLMIV |
13 | Karutha seenati | IRGC 15515-2 | QGLLSFFLSL PWLLSLPSMH LQPDLMIV |
14 | Kotteyaran | IRGC 47383-1 | QGLLSFFLSL PWLLSLPSMH LQPDLMIV |
15 | Kula karupan | IRGC 55328-1 | QGLLSFFLSL PWLLSLPSMH LQPDLMIV |
16 | Kurkaruppan | IRGC 15449-1 | QGLLSFFLSL PWLLSLPSMH LQPDLMIV |
17 | Kurulu wee (White) | IRGC 66518-1 | QGLLSFFLSL PWLLSLPSMH LQPDLMIV |
18 | Kurulutudu | IRGC 36304-1 | QGLLSFFLSL PWLLSLPSMH LQPDLMIV |
19 | Matholuwa | IRGC 8901-1 | QGLLSFFLSL PWLLSLPSMH LQPDLMIV |
20 | Moddai karupan | IRGC 15465-1 | QGLLSFFLSL PWLLSLPSMH LQPDLMIV |
21 | Murunga | IRGC 15428-1 | QGLLSFFLSL PWLLSLPSMH LQPDLMIV |
22 | Mudalige wee | IRGC 74706-1 | QGLLSFFLSL PWLLSLPSMH LQPDLMIV |
23 | Muttu Samba | IRGC 36333-1 | QGLLSFFLSL PWLLSLPSMH LQPDLMIV |
24 | Nalumoolaikarupan | IRGC 8993-1 | QGLLSFFLSL PWLLSLPSMH LQPDLMIV |
25 | Pachchaperumal | IRGC 3474-1 | QGLLSFFLSL PWLLSLP |
26 | Periya vellai | IRGC 15475-1 | QGLLSFFLSL PWLLSLPSMH LQPDLMIV |
27 | Podi heenati | IRGC 36345-1 | QGLLSFFLSL PWLLSLPSMH LQPDLMIV |
28 | Pannithi | IRGC 51049-1 | QGLLSFFLSL PWLLSLPSMH LQPDLMIV |
29 | Podiwee | IRGC 11938-1 | QGLLSFFLSL PWLLSLP |
30 | Pokkali | IRGC 8948-1 | QGLLSFFLSL PWLLSLP |
31 | Puttu nellu | IRGC 55346-1 | QGLLSFFLSL PWLLSLPSMH LQPDLMIV |
32 | Rangoon samba | IRGC 11940-1 | QGLLSFFLSL PWLLSLPSMH LQPDLMIV |
33 | Race perumal | IRGC 55347-1 | QGLLSFFLSL PWLLSLP |
34 | Ranruwan | IRGC 36360-1 | QGLLSFFLSL PWLLSLPSMH LQPDLMIV |
35 | Samba | IRGC 11993-1 | QGLLSFFLSL PWLLSLP |
36 | Sinna sithira kalli | IRGC 51064-1 | QGLLSFFLSL PWLLSLPSMH LQPDLMIV |
37 | Sigardis | IRGC 15555-1 | QGLLSFFLSL PWLLSLPSMH LQPDLMIV |
38 | Sayam | IRGC 31538-1 | QGLLSFFLSL PWLLSLPSMH LQPDLMIV |
39 | Sithaiyankottai samba | IRGC 50155-1 | QGLLSFFLSL PWLLSLP |
40 | Sudu karayal | IRGC 15348-1 | QGLLSFFLSL PWLLSLPSMH LQPDLMIV |
41 | 2Vellai kollumban | IRGC 15517-1 | QGLLSFFLSL PWLLSLPSMH LQPDLMIV |
42 | WIR 1391 | IRGC 51605-1 | QGLLSFFLSL PWLLSLPSMH LQPDLMIV |
43 | 105 | IRGC 40896-1 | QGLLSFFLSL PWLLSLPSMH LQPDLMIV |
44 | 3210 | IRGC 1116950-1 | QGLLSFFLSL PWLLSLP |
45 | A69-1 | IRGC 55305-1 | QGLLSFFLSL LWLLSLPSMH LQPDLMIV |
46 | Bw295-5 | IRGC 63098-1 | QGLLSFFLSL PWLLSLP |
47 | H6 | IRGC 157-1 | QGLLSFFLSL LWLLSLPSMH LQPDLMIV |
