Table 4 Predicted consensus GO terms for YDR models
From: Role of “dual-personality” fragments in HEV adaptation—analysis of Y-domain region
Consensus GO terms | Description |
|---|---|
HEV | |
GO:0020037~heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring |
GO:0009055~electron transfer activity | Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain |
GO:0004129~cytochrome-c oxidase activity | Catalysis of the reaction: 4 ferrocytochrome c + O2 + 4 H+ = 4 ferricytochrome c + 2 H2O |
Human | |
GO:0030598~rRNA N-glycosylase activity | Catalysis of the hydrolysis of the N-glycosylic bond at A-4324 in 28S rRNA from rat ribosomes or corresponding sites in 28S RNA from other species |
Swine | |
GO:0009486~cytochrome bo3 ubiquinol oxidase activity | Catalysis of the reaction: 2 ubiquinol + O2 + 4 H+ = 2 ubiquinone + 2 H2O + 4 H+ [periplasmic space] |
GO:0020037~heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring |
GO:0005507~copper ion binding | Interacting selectively and non-covalently with copper (Cu) ions |
GO:0048039~ubiquinone binding | Interacting selectively and non-covalently with ubiquinone, a quinone derivative with a tail of isoprene units |
GO:0000166~nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose |
GO:0016682~oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction in which a diphenol, or related compound, acts as a hydrogen or electron donor and reduces oxygen |
GO:0015453~-driven active transmembrane transporter activity | Primary active transport of a solute across a membrane, driven by the exothermic flow of electrons from a reduced substrate to an oxidized substrate |
GO:0009055~electron transfer activity | Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain |
GO:0015078~proton transmembrane transporter activity | Enables the transfer of a proton from one side of a membrane to the other |
GO:0018662~phenol 2-monooxygenase activity | Catalysis of the reaction: phenol + NADPH + H+ + O2 = catechol + NADP+ + H2O |
Wild boar | |
GO:0004096~catalase activity | Catalysis of the reaction: 2 hydrogen peroxide = O2 + 2 H2O. |
GO:0020037~heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring |
GO:0016874~ligase activity | Catalysis of the joining of two molecules, or two groups within a single molecule, using the energy from the hydrolysis of ATP, a similar triphosphate, or a pH gradient |
GO:0050242~pyruvate, phosphate dikinase activity | Catalysis of the reaction: ATP + phosphate + pyruvate = AMP + diphosphate + 2 H(+) + phosphoenolpyruvate |
GO:0005524~ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5′-triphosphate, a universally important coenzyme and enzyme regulator |
GO:0016301~kinase activity | Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule |
GO:0004108~citrate (Si)-synthase activity | Catalysis of the reaction: acetyl-CoA + H2O + oxaloacetate = citrate + CoA, where the acetyl group is added to the si-face of oxaloacetate; acetyl-CoA thus provides the two carbon atoms of the pro-S carboxymethyl group |
Camel | |
GO:0043167~ion binding | Interacting selectively and non-covalently with ions, charged atoms, or groups of atoms |