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Table 1 Residues involved in hydrogen bonds and salt bridges between the mutant N protein and the M protein

From: Analysing the impact of the two most common SARS-CoV-2 nucleocapsid protein variants on interactions with membrane protein in silico

Bond type M protein atom M protein residue M protein residue position N protein atom N protein residue N protein residue position Distance
Hydrogen bond N ALA 2 OE2 GLU 323 3.04
Hydrogen bond ND2 ASN 41 O ARG 319 3.01
Hydrogen bond NE ARG 42 O GLN 283 2.9
Hydrogen bond NH1 ARG 42 O ILE 320 2.71
Hydrogen bond NH2 ARG 42 O PHE 286 2.81
Hydrogen bond NH2 ARG 42 O GLY 287 2.66
Hydrogen bond NH2 ARG 42 OD1 ASP 288 2.91
Hydrogen bond NH2 ARG 44 OG SER 312 2.77
Hydrogen bond N ILE 144 O GLY 284 2.8
Hydrogen bond N ARG 146 OD1 ASP 288 3.19
Hydrogen bond NH1 ARG 146 OE1 GLU 323 2.76
Hydrogen bond N GLY 147 OE1 GLU 290 2.84
Hydrogen bond NH1 ARG 150 OE2 GLU 323 2.79
Hydrogen bond NH2 ARG 150 OE1 GLU 323 2.73
Salt bridge NH1 ARG 42 OD1 ASP 288 2.75
Salt bridge NH1 ARG 146 OE2 GLU 323 2.76
Salt bridge NH2 ARG 150 OE2 GLU 323 2.73