Table. 4 Extent of polymorphism as revealed by RAPD, ISSR, DAMD and SCoT primers
Sl. No. | Name of primer | Primer’s sequence | Total no. of band | No. of poly-morphic band | No. of mono-morphic band | % of poly-morphic bands | Resolv-ing power (Rp) | PIC (Poly-morphic information content) | Distance range (Jaccard's coefficient) |
|---|---|---|---|---|---|---|---|---|---|
RAPD | |||||||||
 1 | OPA-11 | 5′-CAATCGCCGT-3′ | 9 | 8 | 1 | 88.88 | 4.60 | 0.88 | 0.57-1.00 |
 2 | OPA-12 | 5′-TCGGCGATAG-3′ | 12 | 12 | 0 | 100.00 | 5.49 | 0.83 |  |
 3 | OPA-13 | 5′-CAGCACCCAC-3′ | 11 | 11 | 0 | 100.00 | 5.00 | 0.87 |  |
 4 | OPB-1 | 5′-GTTTCGCTCC-3′ | 11 | 11 | 0 | 100.00 | 4.64 | 0.80 |  |
 5 | OPB-6 | 5′-TGCTCTGCCC-3′ | 10 | 9 | 1 | 90.00 | 3,75 | 0.79 |  |
 6 | OPH-19 | 5′-CTGACCAGCC-3′ | 13 | 13 | 0 | 100.00 | 5.32 | 0.76 |  |
 7 | OPK-4 | 5′-CCGCCCAAAC-3′ | 7 | 7 | 0 | 100.00 | 2.59 | 0.70 |  |
ISSR | |||||||||
 8 | SUNSRK-5 | 5′-GAGAGAGAGAGAGAGATT-3′ | 9 | 9 | 0 | 100.00 | 3.93 | 0.86 |  |
 9 | SUNSRK-6 | 5′-CTCTCTCTCTCTCTCTTA-3′ | 12 | 12 | 0 | 100.00 | 6.03 | 0.88 |  |
 10 | SUNSRK-11 | 5′-GGCGGCGGCGGCGGCGGC-3′ | 8 | 8 | 0 | 100.00 | 4.45 | 0.89 |  |
 11 | SUNSRK-14 | 5′-CACACACACACAAC-3′ | 10 | 10 | 0 | 100.00 | 6.34 | 0.88 |  |
 12 | SUNSRK-14 | 5′-CACACACACACAGG-3′ | 7 | 7 | 0 | 100.00 | 5.77 | 0.83 |  |
 13 | SUNSRK-21 | 5′-ACACACACACACACACAG-3′ | 8 | 8 | 0 | 100.00 | 4.95 | 0.74 |  |
 14 | SUNSRK-22 | 5′-ACACACACACACACACT-3′ | 7 | 6 | 1 | 85.71 | 2.66 | 0.70 |  |
DAMD | |||||||||
 15 | URP 13R | 5′-TACACGTCTCGATCTACA-3′ | 5 | 5 | 0 | 100.00 | 2.45 | 0.87 |  |
 16 | Oligo 5 | 5′-GACNGGNACNGG-3′ | 10 | 10 | 0 | 100.00 | 2.97 | 0.95 |  |
 17 | URP 38F | 5′-AAGAGGCATTCTACCACC-3′ | 6 | 6 | 0 | 100.00 | 3.40 | 0.88 |  |
 18 | URP 9R | 5′-ATGTGTGCGATCAGTTGC-3′ | 7 | 7 | 0 | 100.00 | 4.57 | 0.79 |  |
 19 | HBV 3 | 5′-GGTGAAGCSCAGGTG-3′ | 9 | 9 | 0 | 100.00 | 3.94 | 0.73 |  |
 20 | URP 25F | 5′-GATGTGTTCTTGGAGCCT-3′ | 8 | 8 | 0 | 100.00 | 4.53 | 0.79 |  |
 21 | Oligo 2 | 5′-CTCTGGGTGTCGTGC-3′ | 9 | 9 | 0 | 100.00 | 5.60 | 0.69 |  |
 22 | HVY | 5′-GCCTTTCCCGAG-3′ | 8 | 8 | 0 | 100.00 | 4.33 | 0.69 |  |
SCoT | |||||||||
 23 | SCOT-1 | 5′-CAACAATGGCTACCACCA-3′ | 8 | 8 | 0 | 100.00 | 3.56 | 0.84 |  |
 24 | SCOT-2 | 5′-CAACAATGGCTACCACCC-3′ | 8 | 8 | 0 | 100.00 | 3.30 | 0.90 |  |
 25 | SCOT-13 | 5′-ACGACATGGCGACCATCG-3′ | 8 | 8 | 0 | 100.00 | 4.57 | 0.86 |  |
 26 | SCOT-14 | 5′-ACGACATGGCGACCACGC-3′ | 10 | 10 | 0 | 100.00 | 4.41 | 0.84 |  |
 27 | SCOT-22 | 5′-AACCATGGCTACCACCAC-3′ | 10 | 10 | 0 | 100.00 | 4.57 | 0.80 |  |
 28 | SCOT-23 | 5′-CACCATGGCTACCACCAG-3′ | 10 | 9 | 1 | 90.00 | 3.40 | 0.76 |  |
| Â | Â | Total | 250 | 246 | 4 | 98.40 | Â | Â | Â |
| Â | Â | Average | 08.92 | 08.78 | 0.14 | Â | Â | Â | Â |