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Table 1 Predictive cutoff score and number of transcription start site for the corresponding genes

From: In silico analysis of promoter region and regulatory elements of mitogenome co-expressed trn gene clusters encoding for bio-pesticide in entomopathogenic fungus, Metarhizium anisopliae: strain ME1

Gene ID

Corresponding promoter region name

No. of TSS identified

Predictive score at cutoff value 0.8a

Distance from start codon (ATG)

4097430

Pro-atp6

3

0.82, 0.82, 0.95

– 1450, – 453, – 445

4097429

Pro-atp8

3

0.82, 0.82, 0.95

– 1195, – 198, – 190

4097423

Pro-atp9

6

0.89,0.88, 0.91, 0.96, 0.92, 0.89

– 1859, – 1804, – 1705, – 1461, – 965, – 576

4097424

Pro-cob

1

0.84

– 2290

4097425

Pro-cox1

3

0.84, 0.85, 0.87

– 1231, – 1159, – 431

4097419

Pro-cox2

6

0.89, 0.88, 0.91, 0.96, 0.92, 0.89

– 2192, – 2136, – 2038, – 1794, – 1,298, – 909

4097431

Pro-cox3

9

0.97, 0.85, 0.92, 0.95, 0.99, 0.97, 0.89, 0.92, 0.92

– 2425, – 2242, – 1804, – 1598, – 1421, – 1280, – 1198, – 1,045, – 340

4097426

Pro-nad1

5

0.87, 0.81, 0.99, 0.91, 0.92

– 2276, – 1667, – 1476, – 829, – 11

4097421

Pro-nad2

5

0.96, 0.98, 0.96, 0.82, 0.80

– 2,949, – 1916, – 1517, – 1405, – 1 230

4097422

Pro-nad3

6

0.89, 0.88, 0.91, 0.96, 0.92, 0.89

– 1310, – 1254, – 1156, – 912, – 416, – 27

4097428

Pro-nad4

5

0.87, 0.81, 0.99, 0.91, 0.94

– 3494, – 2885, – 2694, – 2047, – 1227

4097420

Pro-nad4L

6

0.89, 0.88, 0.91, 0.96, 0.92, 0.89

– 3149, – 3093, 2995, – 2751, – 2255, – 1866

4097417

Pro-nad5

1

0.84

– 95

4097432

Pro-nad6

12

0.97, 0.85, 0.92, 0.95, 0.99, 0.97, 0.89, 0.92, 0.92, 0.92, 0.83, 0.87

– 3420, – 3237, – 2799, – 2593, – 2416, – 2275, – 2193, – 2,040, – 1,335, – 969, -717,-56

4097418

Pro-rp3

4

0.93, 0.87, 0.90, 0.95

– 1898, 1725, – 1301, – 983

  1. aNNPP version 2.2 tool set was used with the minimum standard predictive promoter score with a default cut off value 0.8