Table 5 The Ramachandran plot structure validation of original and refined structures
From: In silico Structural, Functional and Phylogenetic Analyses of cellulase from Ruminococcus albus
Model | Favored region (%) | Additional allowed region (%) | Generously allowed region (%) | Disallowed region (%) | |
|---|---|---|---|---|---|
Swiss model | Original | 86.4 | 12.6 | 0.7 | 0.3 |
Refined | 87.7 | 11.3 | 0.3 | 0.7 | |
Raptor X | Original | 88.5 | 10.2 | 1.2 | 0.0 |
Refined | 90.1 | 9.0 | 0.6 | 0.3 | |
PS2-V2 | Original | 85.4 | 12.7 | 1.6 | 0.3 |
Refined | 90.4 | 7.8 | 0.6 | 1.2 | |
LOMETS | Original | 83.5 | 13.0 | 2.5 | 0.9 |
Refined | 90.1 | 7.8 | 1.2 | 0.9 | |
Phyre | Original | 82.6 | 12.7 | 2.5 | 2.2 |
Refined | 88.8 | 9.3 | 1.2 | 0.6 | |