Table 4 Predicted secondary structure content and disulfide bridges from 6 cellulase proteins of Ruminococcus albus strains and from 10 selected template structures
From: In silico Structural, Functional and Phylogenetic Analyses of cellulase from Ruminococcus albus
No. | Accession no. | Alpha helix | Extended strand | Beta turn | Random coil | Disulfide bridge prediction |
|---|---|---|---|---|---|---|
Cellulase protein | ||||||
 1. | P23660 (Target) | 37.91 | 14.01 | 5.77 | 42.31 | None |
 2. | A0A011UFY5 | 37.05 | 12.11 | 4.60 | 46.25 | 23–398 |
 3. | A0A1H7KSB4 | 36.80 | 12.59 | 4.84 | 45.76 | 23–362 |
 4. | A0A1I1KHA3 | 40.44 | 12.11 | 4.36 | 43.10 | 23–398 |
 5. | Q59733 | 40.34 | 12.08 | 4.11 | 43.48 | 23–398 |
 6. | E6UGI8 | 38.78 | 13.41 | 4.88 | 42.93 | 23–375 |
Templates | ||||||
 7. | 1EDG_A | 35.00 | 12.63 | 5.00 | 47.37 | None |
 8. | 6MQ4_A | 35.98 | 15.01 | 5.10 | 43.91 | None |
 9. | 4NF7_A | 37.47 | 13.50 | 4.68 | 44.35 | 117–221 |
 10. | 4IM4_A | 37.80 | 15.18 | 3.87 | 43.15 | None |
 11. | 6GL2_A | 36.20 | 15.43 | 4.45 | 43.92 | 235–304 |
 12. | 6WQP_A | 35.59 | 14.12 | 4.24 | 46.05 | 207–217 |
 13. | 3NDY_A | 36.81 | 13.91 | 4.93 | 44.35 | None |
 14. | 3AYR_A | 39.89 | 13.03 | 5.05 | 42.02 | None |
 15. | 3AYS_A | 35.11 | 15.69 | 6.12 | 43.09 | 41–221 |
 16. | 6Q1I_A | 36.41 | 14.01 | 4.76 | 44.82 | None |
 17. | 1EDG_A | 35.00 | 12.63 | 5.00 | 47.37 | None |