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Journal of Genetic Engineering and Biotechnology

Table 1 Detected SNPs in the amplified LEP sequence and its homologs Bubalus bubalis sequences in the GenBank database and previous studies

From: Detection of polymorphism within leptin gene in Egyptian river buffalo and predict its effects on different molecular levels

Region

SNP

Alleles

GenBank accession number or reference

Intron 2

T27C

C

KP897166.1, EU825672.1, GQ385228.1

Intron 2

C32T

C

HE605297.1, AH013754.2, AF387814.1, EU888289.1, JN689387.1, AY338973.2, KP897165.1, KP897166.1, DQ831143.1, DQ831142.1, EU825674.1, EU825673.1, EU825672.1, GQ385228.1, DQ490986.1

Intron 2

C33T

T

GQ385228.1

Exon 3

A114G

G

EU888289.1

Exon 3

G140A

G and A

[8]

G

HE605297.1, AH013754.2, AF387814.1, EU194869.1, EU199796.1, EU888289.1, KP864439.1, NM_001290901.1, KP864440.1, KP864438.1, KP864436.1, KP864437.1, AY427959.1, JN689387.1,DQ676889.1, AY338973.2, AY177609.1, JQ045625.1, KP897165.1, KP897166.1, DQ831143.1, DQ831142.1, EU825674.1, EU825673.1, EU825672.1, GQ385228.1, DQ490986.1

A

DQ676890.1

Exon 3

C163A

A

EU825672.1, EU825673.1, EU825674.1, GQ385228.1

Exon 3

T197C

C

AY177609.1, JQ045625.1

Exon 3

G206A

A

AY177609.1

Exon 3

A211G

G

JQ045625.1

Exon 3

C242T

T

EU078405.1

Exon 3

G263A

G and A

[8, 9]

G

HE605297.1, AF387814.1, EU194869.1, EU199796.1, KP864439.1, NM_001290901.1, KP864438.1, AY427959.1, JN689387.1, DQ676890.1, DQ676889.1, AY177609.1, JQ045625.1, KP897165.1, KP897166.1

A

AH013754.2, EU888289.1, KP864436.1, KP864437.1, KP864440.1, AY338973.2

Exon 3

G278A

G and A

AF387814.1

A

KP864438.1, AY427959.1

Exon 3

G278A

G and A

[8]

Exon 3

T284C

C

AY177609.1, JQ045625.1

Exon 3

G288A

A

AY177609.1

Exon 3

C302T

T

AY177609.1, JQ045625.1

Exon 3

A310G

G

KP864436.1, KP864437.1, KP864438.1. KP864439.1, KP864440.1

Exon 3

C314T

T

AY177609.1, JQ045625.1

Exon 3

A322G

G

JN689387.1

Exon 3

G330C

C

JQ045625.1

Exon 3

C348T

T

JQ045625.1

Exon 3

T360C

C

HE605297.1

Exon 3

G379A

G and A

[8, 9]

G

HE605297.1, AH013754.2, AF387814.1, EU199796.1, KP864439.1, NM_001290901.1, KP864440.1, KP864438.1, KP864436.1, KP864437.1, AY427959.1, DQ676889.1

A

EU194869.1, DQ676890.1

Exon 3

G386A

A

KP864437.1

Exon 3

T398C

C

NM_001290901.1, AY427959.1

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