Table 2 Distribution of different motifs with best possible match amino acid sequences along with functional domains
From: In silico characterization and structural modeling of bacterial metalloprotease of family M4
Motif no. | Width | Best possible amino acids | Domain |
|---|---|---|---|
1 | 41 | PSGSJDVVAHELTHGVTEQTAGLVYZNZSGAJNEAFSDIFG | Peptidase_M4 and Peptidase_M4_C |
2 | 15 | GVHTNSGIINKAAYL | Peptidase_M4_C |
3 | 16 | VHYGSNYNNAFWBGSQ | Peptidase_M4 |
4 | 41 | VTGIGVRKAFEIFYRALTLYLTPNSTFSQARAAVVQAAKDL | Peptidase_M4_C |
5 | 21 | AVDAHYYAGVVYDYYKBWFNR | Peptidase_M4 |
6 | 17 | ALRSMSDPSKYGQPDHY | Peptidase_M4_C |
7 | 29 | FLTPEPGRWFYFIDAETGKVLNKWNGLNH | PepSY |
8 | 29 | TDPNGKTHVRYZQTYNGIPVYGSVVVAHV | FTP |
9 | 41 | SYYYLQDNTRGSGIFTYDAKNRTTLPGSLWADADNQFFASY | Peptidase_M4 |
10 | 50 | SGDADLYVKAGSKPTTSSWDCRPYKSGNNEQCSISAQPGTTYHVMLRGYS | PPC |