Table 1 Biochemical features of M4 metalloprotease protein sequences from different bacterial species
From: In silico characterization and structural modeling of bacterial metalloprotease of family M4
S.N. | Bacteria Name | UniProtKB | Seq length | MW | pI | EC | Ii | Ai | GRAVY | −R | +R |
|---|---|---|---|---|---|---|---|---|---|---|---|
1 | Aeromonas hydrophila | I2A620 | 590 | 62969.1 | 6.02 | 99615 | 25.25 | 69.47 | − 0.245 | 52 | 46 |
2 | Bacillus thermoproteolyticus | P00800 | 548 | 60103.9 | 5.53 | 81140 | 26.43 | 76.35 | − 0.392 | 59 | 48 |
3 | B. stearothermophilus | P43133 | 551 | 60616.6 | 5.82 | 81140 | 26.78 | 76.46 | − 0.397 | 59 | 51 |
4 | B. subtilis Amylosacchariticus | P68735 | 521 | 56521.7 | 7.16 | 63720 | 30.09 | 74.38 | − 0.51 | 53 | 53 |
5 | B. subtilis | P68736 | 521 | 56521.7 | 7.16 | 63720 | 30.09 | 74.38 | − 0.51 | 53 | 53 |
6 | B. cereus | P05806 | 566 | 60919.3 | 5.7 | 75640 | 29.23 | 69.98 | − 0.484 | 64 | 56 |
7 | B. brevis | P43263 | 527 | 58645.7 | 5.33 | 90650 | 29.44 | 68.67 | − 0.598 | 70 | 50 |
8 | B. polymyxa | P29148 | 590 | 63528.7 | 4.88 | 86640 | 26.19 | 75.1 | − 0.43 | 74 | 50 |
9 | B. caldolyticus | Q59193 | 546 | 59770.6 | 5.39 | 102110 | 29.36 | 73.97 | − 0.372 | 60 | 48 |
10 | B. megaterium | P0CH29 | 562 | 60948.6 | 8.4 | 83090 | 29.61 | 70.64 | − 0.52 | 55 | 58 |
11 | B. amyloliquefaciens | P06832 | 521 | 56840.3 | 8.2 | 65210 | 26.14 | 75.09 | − 0.538 | 53 | 55 |
12 | B. acidocaldarius | Q43880 | 546 | 59769.6 | 5.47 | 102110 | 29.95 | 73.97 | − 0.372 | 59 | 48 |
13 | Bacillus sp. EA1 | Q59223 | 546 | 59812.7 | 5.39 | 102110 | 29.08 | 74.51 | − 0.363 | 60 | 48 |
14 | Clostridium putrefaciens | A0A381J9B8 | 553 | 61718.7 | 4.9 | 77255 | 31.24 | 77.72 | − 0.444 | 73 | 49 |
15 | Enterococcus faecalis | Q833V7 | 510 | 55503.8 | 4.97 | 48250 | 22.68 | 81.98 | − 0.348 | 67 | 43 |
16 | Erwinia carotovora | Q99132 | 347 | 38828.4 | 5.48 | 51005 | 38.81 | 79.31 | − 0.422 | 42 | 25 |
17 | Legionella longbeachae | P55110 | 529 | 58712.6 | 5.71 | 93880 | 36.35 | 65.46 | − 0.435 | 59 | 46 |
18 | Legionella pneumophila | P21347 | 543 | 60704.1 | 5.27 | 95370 | 34.62 | 64.83 | − 0.491 | 66 | 47 |
19 | Listeria monocytogenes | P23224 | 510 | 57411 | 6.61 | 62020 | 27.85 | 80.53 | − 0.477 | 68 | 65 |
20 | Pseudomonas aeruginosa | P14756 | 498 | 53687.1 | 6.28 | 65000 | 26.9 | 73.49 | − 0.271 | 50 | 46 |
21 | Renibacterium salmoninarum | P55111 | 548 | 56378.6 | 5.2 | 47245 | 17.53 | 79.73 | − 0.095 | 47 | 40 |
22 | Staphylococcus aureus | P81177 | 509 | 56320.9 | 5.02 | 56730 | 23.75 | 68.21 | − 0.732 | 80 | 56 |
23 | Staphylococcus epidermidis | P0C0Q3 | 507 | 55813.5 | 5.35 | 55240 | 29.37 | 69.45 | − 0.691 | 68 | 56 |
24 | Streptomyces lividans | D6EEH2 | 547 | 56812.3 | 4.75 | 84145 | 19.32 | 75.43 | − 0.235 | 71 | 43 |
25 | Serratia marcescens | Q06517 | 352 | 38515.3 | 10 | 49640 | 52.68 | 65.26 | − 0.698 | 29 | 48 |
26 | Vibrio proteolyticus | Q00971 | 609 | 66362.5 | 5.07 | 88045 | 30.55 | 64.84 | − 0.359 | 64 | 45 |
27 | Vibrio anguillarum | P43147 | 611 | 66726.5 | 5.7 | 92055 | 30.83 | 68.43 | − 0.292 | 53 | 44 |
28 | Vibrio aestuarianus | A8JNY9 | 611 | 66344.9 | 5.33 | 93545 | 30.57 | 72.9 | − 0.252 | 54 | 41 |
29 | Vibrio vulnificus | O06694 | 606 | 65613.9 | 6.17 | 93085 | 32.45 | 66.67 | − 0.341 | 54 | 48 |
30 | Vibrio cholerae | P24153 | 609 | 65891.2 | 5.26 | 92055 | 25.18 | 68.82 | − 0.25 | 53 | 39 |
31 | Vibrio splendidus | Q76LC2 | 607 | 65879 | 5.74 | 88045 | 30.39 | 68.29 | − 0.332 | 56 | 46 |