Table 1 Microsatellite loci used, annealing temperatures, primers sequence, gene bank accession numbers, and reported type and size range with jumbo and grey Japanese quail strains
From: Genetic and physiological variation in two strains of Japanese quail
Locus name | AT. (°C) | Primers sequence | Chromosome no. | Gene Bank accession no. | Repeat type | Band Size (bp) |
|---|---|---|---|---|---|---|
GUJ0013 | 55 | ACCAAACCCGAGATCCGACA AGCGTTCGCGTTCCTCTTTC | GGA1 | AB035823 | (CA)10 | 80–100 |
GUJ0021 | 62 | GAGCATTTCTAGTCTGTCTC GATCAATACACAGGCTAAGG | CJA06 | AB035831 | (CA)11 | 155–188 |
GUJ0028 | 54.6 | TGAACAAAGCAGAAAGGAGC CCTTACCTACATGAAACGTC | QL08 | AB035838 | (CA)9 | 104–167 |
GUJ0048 | 55 | AACGCATACAACTGACTGGG GGATAGCATTTCAGTCACGG | CJA01 | AB035858 | (CA)14 | 52–94 |
GUJ0051 | 55 | CCTTAACCACTCCTACTGAC TTTTGTAAGTGGCCCCGTAC | CJA01 | AB063119 | (CA)10 | 45–65 |
GUJ0052 | 55 | AAACTACCGATGTAAGTAAG ATGAGATATATAAGGAACCC | CJA01 | AB063120 | (CA)12 | 55–151 |
GUJ0053 | 64 | GCTGGAGTTTTACATGCACG TGGATTATGATGCTGACATAAG | Unknown | AB063121 | (CA)19 | 177–215 |
GUJ0054 | 55 | GTGTTCTCTCACTCCCCAAT ATGTGAGCAATTGGGACTG | CJA06 | AB063122 | (CA)7 | 54–103 |
GUJ0057 | 62 | GGAATGGAAAATATGAGAGC CAGGTGTTAAAGTCCAATGT | CJA03 | AB063125 | (CA)12 | 130–250 |
GUJ0087 | 55 | CATGCCGGCTGCTATGACAG AAGTGCAGGGAGCGAGGAAG | CJA06 | AB063155 | (CT)12AA(CA)11 | 154–198 |
GUJ0099 | 55 | CTCTTATCCATCCTTCCTTC TTTTAAGTTTCCCCAGGCAG | CJA03 | AB063167 | (CA)16GA(CA)5(TA)7 | 35–77 |
UBC001 | 48 | TCTCTAAAATCCAGCCCTAA AGCTCCTTGTACCCTATTGC | 1 | AF121113 | (CAG)3 N9(CA)3TA(CA)5 | 475–610 |
UBC002 | 50 | CAGCCAATAGGGATAAAAGC CTGTAGATGCCAAGGAGTGC | 6 | AF121114 | (AT)3 T(CT)11A(AC)7 | 190–253 |
UBC005 | 57 | GGAACATGTAGACAAAAGC AGTAGTCCATTTCCACAGCCA | 3 | AF121117 | (AC)9 | 100–181 |