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Table 5 Identification of MSpI cutting sites and fragment sizes for genes encoding for alcohol production body and promoter regions of S. cerevisiaea S288C and S. pombe 972h-

From: In silico analysis of promoter regions and regulatory elements (motifs and CpG islands) of the genes encoding for alcohol production in Saccharomyces cerevisiaea S288C and Schizosaccharomyces pombe 972h-

S. Cerevisiaea S288C

S. pombe 972h-

 

Gene body

Promoter regions

Sequence name

Gene body

Promoter regions

Sequence name

No. of cut sites (cut position/s)

Fragment size

No. of cut sites (cut position/s)

Fragment size

No. of cut sites (cut position/s)

Fragment size

No. of cut sites (cut position/s)

Fragment size

ADH1

  

1 (632)

adh1

  

2 (644, 743)

99

ADH3

0

1 (827)

adh4

0

3 (71, 501, 570)

69

ADH4

1 (146)

2 (276, 650)

SPBC1773.06c

1 (940)

0

ADH5

2 (88, 539)

1 (827)

prl

1 (289)

0

ADH6

1 (992)

2 (271, 979)

SPBC8E4.04

0

1 (736)

ADH7

0

1 (507)

SPCC13B11.04c

1 (553)

3 (95, 316, 506)

AAD10

0

1 (489)

SPAC19G12.09

1(401)

0

AAD14

3 (74, 314, 991)

1 (440)

SPAC2E1P3.01

1 (825)

0

AAD15

1 (322)

0

Yak3

1 (511)

0

AAD3

0

0

SPAP32A8.02

1 (353)

2 (886, 933)

47

AAD4

2 (176, 928)

2 (236, 902)

SPAC26F1.07

2 (74, 941)

0

AAD6

1 (1065)

1 (428)

erg27

2 (29, 787)

0

ARA1

2 (307, 454)

147

0

SPBC16A3.02c

2 (238, 431)

193

0

BDH2

3 (315, 481, 806)

166

2 (411, 918)

SPBC337.11

2 (331, 577)

2 (855, 948)

93

GCY1

2 (697, 737)

40

2 (198, 977)

SPAC977.14c

0

1 (739)

GRE3

1 (456)

2 (331, 496)

185

SPCC1281.04

0

0

SFA1

2 (221, 326)

105

1 (273)

SPAC750.01

0

0

YFL041W–A

0

1 (768)

SPAC2F3.05c

0

0

YKL071W

1 (550)

1 (142)

SPAC3A11.11c

1 (809)

1 (942)

YPR127W

1 (868)

0

SPBC215.11c

 

0

YPR1

2 (206, 268)

62

1 (81)