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Table 1 TSS number, its promoter predictive score values, and distance from the start codon of S. cerevisiaea S288C

From: In silico analysis of promoter regions and regulatory elements (motifs and CpG islands) of the genes encoding for alcohol production in Saccharomyces cerevisiaea S288C and Schizosaccharomyces pombe 972h-

Gene name

Gene ID

Location

Number of TSS

Predictive score at cutoff value of 0.8

Distance from start codon (ATG)

Alcohol dehydrogenase ADH1

854068

Chromosome XV; NC_001147.6 (c160594-159548)

1

0.99

− 1545

Alcohol dehydrogenase ADH2

855349

Chromosome XIII; NC_001145.3 (c874337-873291)

4

0.98, 0.93, 0.92, 0.91

− 130, − 467, − 197, − 177

S-(Hydroxymethyl) glutathione dehydrogenase SFA1

851386

Chromosome IV; NC_001136.10 (159604-160764)

3

1.00, 0.94, 0.89

− 789, − 159, − 531

Alcohol dehydrogenase ADH3

855107

Chromosome XIII; NC_001145.3 (434788-435915)

3

0.91, 0.89, 0.88

− 31, − 639, − 657

Alcohol dehydrogenase ADH4

852636

Chromosome VII; NC_001139.9 (15159-16307)

2

0.89, 0.86

− 95, − 120

Alcohol dehydrogenase ADH5

852442

Chromosome II, NC_001134.8 (533762-534817)

6

0.96, 0.91, 0.86, 0.84, 0.8, 0.8

− 90, − 737, − 224, − 703,

− 688, − 715

Alcohol dehydrogenase ADH6

855368

Chromosome XIII, NC_001145.3 (c912143-911061)

3

0.94, 0.93, 0.89

− 215, − 822, − 71

NADP-dependent alcohol dehydrogenase (ADH7)

850469

Chromosome III, NC_001135.5 (309070-310155)

1

0.93

− 63

Putative aryl-alcohol dehydrogenase (AAD3)

850471

Chromosome III, NC_001135.5 (313890-314981)

2

0.98, 0.98

− 133, − 199

Putative aryl-alcohol dehydrogenase AAD4

851354

Chromosome IV, NC_001136.10 (c17577-18566)

4

1.00, 0.96, 0.92, 0.90

− 759, − 356, − 245, − 42

Aryl-alcohol dehydrogenase (NADP+) activity (AAD6)

850488

Chromosome VI, NC_001138.5 (c14305-15431)

5

0.97, 0.89, 0.86, 0.85, 0.80

− 101, − 518, − 734, − 457, − 28

Putative aryl-alcohol dehydrogenase AAD10

853620

Chromosome X, NC_001142.9 (727405-728271)

3

0.97, 0.86, 0.83

− 654, − 359, − 171

Putative aryl-alcohol dehydrogenase AAD14

855385

Chromosome XIV, NC_001146.8 (c16118-17248)

2

0.94, 0.81

− 663, − 452

Putative aryl-alcohol dehydrogenase AAD15

853999

Chromosome XV, NC_001147.6 (c1647-2078)

2

0.94, 0.86

− 492, − 955

D-Arabinose 1-dehydrogenase (NAD(P)(+)) ARA1

852446

Chromosome II, NC_001134.8 (539987..541021)

2

0.98, 0.95

− 147, − 92

Glucose-6-phosphate dehydrogenase (ZWF1)

855480

Chromosome XIV, NC_001146.8 (c196426..197943)

4

0.99, 0.94, 0.86, 0.85

− 318, − 145, − 636, − 120

Glycerol 2-dehydrogenase (NADP(+)) GCY1

854287

Chromosome XV, NC_001147.6 (551114-552052)

4

0.99, 0.97, 0.92, 0.91

− 357, − 85,− 899, − 829

Trifunctional aldehyde reductase/xylose reductase/glucose 1-dehydrogenase (NADP(+))GRE3

856504

Chromosome VIII, NC_001140.6 (323409-324392)

3

1.00, 0.96, 0.90

− 355, − 778, − 679

Putative dehydrogenase BDH2

851238

Chromosome I, NC_001133.9 (33448-34701)

2

0.99, 0.8

− 146, − 154

Glucose 1-dehydrogenase (NADP(+)) YPR1

851974

Chromosome IV, NC_001136.10 (1213904-1214842)

3

0.87, 0.83, 0.83

− 97, − 10, − 252

Hypothetical protein YKL071W

853792

Chromosome XI, NC_001143.9 (305114-305884)

3

1.00, 0.95, 0.93

− 73, − 513, − 881

Hypothetical protein YFL041W-A

1466401

Chromosome VI, NC_001138.5 (48734..48925)

2

0.97, 0.84

− 866, − 115

Pyridoxine 4-dehydrogenase (YPR127W)

856245

Chromosome XVI, NC_001148.4 (790083..791120)

2

1.00, 0.83

− 437, − 776

  1. Note: Figures in italics were taken as cutoff point and respective distances for more than one TSS