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Fig. 4 | Journal of Genetic Engineering and Biotechnology

Fig. 4

From: Remarkable shift in structural and functional properties of an animal charcoal-polluted soil accentuated by inorganic nutrient amendment

Fig. 4

The benzoate degradation pathway performed using the KEGG pathway in KEGG Orthology. EC numbers in red are the benzoate degradation genes identified in the FN1 microcosm. The identified genes include pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24], mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10], aliB; cyclohexanecarboxyl-CoA dehydrogenase [EC:1.3.99.-], pimeloyl-CoA dehydrogenase [EC:1.3.1.62], benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-], benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-], badH; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-], had; 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase [EC:1.1.1.368], dmpD; 2-hydroxymuconate-semialdehyde hydrolase [EC:3.7.1.9], ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312], CMLE; carboxy-cis,cis-muconate cyclase [EC:5.5.1.5], pcaL; 3-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylase [EC:3.1.1.24 4.1.1.44], acd; glutaryl-CoA dehydrogenase (non-decarboxylating) [EC:1.3.99.32], cyclohex-1-ene-1-carbonyl-CoA dehydrogenase [EC:1.3.8.10] and cyclohexane-1-carbonyl-CoA dehydrogenase [EC:1.3.8.11]

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