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Table 11 In silico PCR analysis of primer pair catAf/catAr with targeted sequences

From: In silico design and validation of a highly degenerate primer pair: a systematic approach

Bacterial strains

Accession numbers

Product size

Product length

Primer dimer Tm (°C)

Burkholderia ambifaria AMMD

NC_008392.1

374

317-690

24.0

Rhodococcus ruber YC-YT1

NZ_CP023714.1

371

451-821

24.

Mycolicibacterium smegmatis NCTC8159

NZ_LN831039.1

365

353-717

24.0

Rhodococcus erythropolis BG43

NZ_CP011295.1

368

299-666

24.0

Burkholderia vietnamiensis LMG 10929

NZ_CP009632.1

374

373-746

24.0

Klebsiella aerogenes KCTC 2190

NC_015663.1

365

308-672

24.0

Acinetobacter seifertii

NIPH 973

NZ_KB851200.1

371

296-666

24.0

Escherichia fergusonii ATCC 35469

NC_011740.1

365

308-672

24.0

Rhodococcus fascians D188

NZ_CP015235.1

368

329-696

24.0

Kocuria rosea ATCC 186

NZ_CP035103.1

368

326-693

24.0

Acinetobacter schindleri SGAir0122

NZ_CP025618.2

371

296-666

24.0

Acinetobacter nosocomialis strain 6411

NZ_CP010368.1

371

296-666

24.0

Pseudomonas fragi NMC25

NZ_CP021132.1

365

308-675

24.0

Acinetobacter calcoaceticus CA16

NZ_CP020000.1

371

296-666

24.0

Acinetobacter oleivorans DR1

NC_014259.1

371

296-666

24.0