Protein | Rank | C-score | Cluster size | PDB hit | Ligand name | Ligand binding site residues |
---|---|---|---|---|---|---|
RP1 | 1 | 0.09 | 4 | 3sfzA | ADP | 115, 117–119, 121, 145, 146, 148-151 |
2 | 0.07 | 4 | 4m9sC | PEPTIDE | 360, 363, 364, 371, 372, 375, 455, 456, 459 | |
3 | 0.05 | 2 | 5aorB | MG | 150, 216 | |
4 | 0.04 | 2 | 3shfA | GBL | 378, 379, 453, 460 | |
5 | 0.02 | 1 | 5hhjA | GLY | 271, 274 | |
RP2 | 1 | 0.04 | 3 | 4hb4C | LMB | 181, 188, 192, 195, 198, 201 |
2 | 0.04 | 3 | 3an2E | Nuc. Acid | 828, 829, 830 | |
3 | 0.03 | 2 | 2z4rA | MG | 295, 365, 366 | |
4 | 0.03 | 2 | 2a5yB | ATP | 255, 258, 290–296, 397, 425, 429, 457, 458 | |
5 | 0.03 | 2 | 4hazC | LBF | 182, 189, 192, 201, 204 | |
RP3 | 1 | 0.09 | 6 | 2a5yB | 2S2 | 1366, 1368, 1388–1390, 1427, 1429, 1430, 1465–1467 |
2 | 0.09 | 6 | 3c6oB | ATP | 621, 624, 671–677, 779, 806, 810, 837, 838, 841, 868 | |
3 | 0.03 | 2 | 5d0fA | MTT | 939, 942, 943, 946 | |
4 | 0.02 | 1 | 2a5yC | MG | 676, 748 | |
5 | 0.02 | 1 | N/A | N/A | 884, 939 | |
RP4 | 1 | 0.21 | 7 | 3sfzA | ADP | 247, 249–251, 254, 282–288, 446, 447, 450, 556, 570 |
2 | 0.05 | 2 | 4m9zA | MG | 287, 359, 360, 386 | |
3 | 0.05 | 2 | 2qbyA | MG | 287, 359, 447 | |
4 | 0.03 | 1 | N/A | N/A | 844, 866, 870, 872, 874, 926, 933, 935, 941, 945, 947 | |
5 | 0.02 | 1 | N/A | N/A | 621, 625, 628, 665, 669 | |
RP5 | 1 | 0.07 | 5 | 1m7sA | HEM | 1254, 1258 |
2 | 0.04 | 3 | 3cr3A | MG | 638, 639 | |
3 | 0.03 | 2 | 4rkuG | CLA | 773, 776 | |
4 | 0.03 | 2 | 4hzcG | MG | 760, 762 | |
5 | 0.02 | 1 | N/A | N/A | 1142, 1145, 1154, 1156, 1160, 1164–1168, 1173, 1176 | |
RP6 | 1 | 0.08 | 4 | 3c6oB | 2S2 | 849, 851, 911–913, 934, 936, 937, 977, 978, 979 |
2 | 0.06 | 3 | 2p1nB | CFA | 728, 730, 764, 765, 766, 789, 790, 812–814 | |
3 | 0.03 | 1 | 1vt4l | MG | 208, 279 | |
4 | 0.02 | 1 | 1koiA | NO | 568, 571 | |
5 | 0.02 | 1 | 3w3A | L07 | 704, 733, 769 | |
RP7 | 1 | 0.10 | 5 | 1vt4I | MG | 208, 279 |
2 | 0.08 | 5 | 2a5yB | ATP | 168, 171, 203–209, 309, 336, 340, 367, 368, 371, 399, | |
3 | 0.06 | 4 | 3c6oB | 2S2 | 811, 813, 848–850, 909, 911, 936, 937, 938 | |
4 | 0.05 | 3 | 3ogkB | OGK | 727, 763–765, 788, 790, 813, 848, 913, 935 | |
5 | 0.05 | 3 | 2p1pB | IAC | 911, 936–938, 977, 978, 997, 998, 999, 1029 | |
RP8 | 1 | 0.23 | 11 | 4kxfK | ADP | 136, 138, 153, 156–158, 189–194, 321, 329, 360, 361, 364 |
2 | 0.08 | 4 | 3u60E | MG | 193, 270, 271, 361 | |
3 | 0.04 | 2 | 3t6qA | MAN | 616, 641 | |
4 | 0.02 | 1 | 3w3nB | RX8 | 571, 573, 574, 597, 599, 623 | |
5 | 0.02 | 1 | 3b2dA | MAN | 662, 687 |