Table 1 Protein BLAST analysis of the H. trueperi SS1 genomic DNA insert present in STC. The predicted ORFs and their BLAST hits are indicated
Clone STC | Open reading frame (ORF) | Best match | |||
|---|---|---|---|---|---|
Protein name accession number | Size aa | Organism | Identity | ||
Insert size 2301 bp | 3′–5′ FRAME 3 | Putative multidrug export ATP binding/permease protein | 101 | Halobacillus karajensis GN=BN983_ 02429 | 95/98 = 97% |
3′–5′ FRAME 2 | Putative multidrug export ATP binding/permease protein | 153 | Halobacillus karajensis GN=BN983 _02429 | 134/143 = 94% | |
5′–3′ FRAME 2 | Putative membrane protein | 165 | Halobacillus karajensis GN=BN983 _02430 | 148/165 = 90% | |
3′–5′ FRAME 1 | Multidrug ABC transporter ATP binding protein OS | 99 | Halobacillus sp. BBL2006 | 23/34 = 64% | |
5′–3′ FRAME 3 | Membrane protein | 49 | Aquimarina sp. GN=AT012 _12720 | 13/39 = 33% | |
5′–3′ FRAME 1 | Glycosyl transferase family | 29 | Geobacter lovleyi ATCC BAA-1151 | 16/55 = 29% | |