Table 3 Information obtained from AFLP using four primer combinations in Origanum species
From: Genetic diversity analysis of some Egyptian Origanum and Thymus species using AFLP markers
Parameters and their abbreviations | Â | AFLP |
|---|---|---|
Number of primer combinations | U | 4 |
Number of non-polymorphic bands | nnp | 90 |
Number of polymorphic bands | np | 103 |
Average number of polymorphic bands/assay unit | np/U | 26 |
Number of loci | L | 193 |
Number of loci/assay unit | nu | 48 |
Total number of effective alleles | Ne | 221 |
Total banding pattern | Bp | 51 |
Effective number of patterns/ assay unit | P | 13 |
Min range of PIC value | PIC | 0.9776 |
Max range of PIC value | PIC | 0.9863 |
Average of PIC | PIC | 0.9819 |
Fraction of polymorphic loci | β | 0.5336 |
Assay efficiency index | Ai | 55.3607 |
Effective multiplex ratio | E | 25.75 |
Marker index | MI | 25.52 |