Table 2 AFLP primer combinations, selective nucleotides, number of polymorphic bands, total bands, polymorphism percentage, and fragment size range in Origanum species
From: Genetic diversity analysis of some Egyptian Origanum and Thymus species using AFLP markers
Primer comb. | Selective nucleotides | Number of bands | Polymorphism percentage | Fragment size Range scored | |||
|---|---|---|---|---|---|---|---|
EcoRI | MseI | Total | Polymorphic | Monomorphic | |||
E-AGC/M-CAA | AGC | CAA | 40 | 26 | 14 | 65% | 130–990 bp |
E-AGC/M-CAC | AGC | CAC | 29 | – | 29 | 0% | 260–1000 bp |
E-AGG/M-CTC | AGG | CTC | 67 | 46 | 21 | 69% | 115–1100 bp |
E-ACC/M-CAT | ACC | CAT | 57 | 31 | 26 | 54% | 105–1100 bp |
Total | Â | Â | 193 | 103 | 90 | Â | Â |
Average | Â | Â | 48 | 25 | 22 | 47% | Â |