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Table 4 Provides more specific breakdown of information on pathways and sequences

From: Metagenomic analysis of soybean endosphere microbiome to reveal signatures of microbes for health and disease

Pathway

Species

#Seqs

KO

CMP-KDO biosynthesis II (from D-arabinose 5-phosphate)

Arabidopsis lyrate

k141_2112_1

AT1G53000.1

TCA cycle (plant)

 

K01681

Fatty acid biosynthesis

None

k141_2161_1

K00208

Citrate cycle (TCA cycle)

None

k141_1768_1

K01647

Biotin metabolism

None

k141_2161_1

K00208

Lipopolysaccharide biosynthesis

None

k141_2112_1

K01627

Porphyrin and chlorophyll metabolism

None

k141_566_2

K00230

k141_503_2

Glyoxylate and dicarboxylate metabolism

None

k141_1768_1

K01647

Prodigiosin biosynthesis

None

k141_2161_1

K00208

ABC transporters

None

k141_1767_1

K09996

Biosynthesis of cofactors

None

k141_566_2

K09996

k141_503_2

K09997

k141_2161_1

Ribosome

None

k141_588_1

K02950

k141_2090_1

k141_1643_1

k141_1118_1

k141_1964_1

k141_2047_1

k141_1682_1

Two-component system

None

k141_1278_1

s

K03406

Biosynthesis of nucleotide sugars

None

K01627

Bacterial chemotaxis

None

K03406

Citric acid cycle (TCA cycle)

Saccharomyces cerevisiae

k141_1768_1

K01647